Detailed information NTG0562492

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L6L71_RS21270
• Genome accession: NZ_CP091662
• Coordinates: 4428999..4430024 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain KFu023
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4423999..4435024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6L71_RS21250 (L6L71_21210)	metJ	4425060..4425377 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
L6L71_RS21255 (L6L71_21215)	yiiX	4425561..4426169 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
L6L71_RS21260 (L6L71_21220)	rpmE	4426230..4426442 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
L6L71_RS21265 (L6L71_21225)	priA	4426645..4428843 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
L6L71_RS21270 (L6L71_21230)	cytR	4428999..4430024 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L6L71_RS21275 (L6L71_21235)	ftsN	4430116..4431075 (+)	960	WP_000068828.1	cell division protein FtsN	-
L6L71_RS21280 (L6L71_21240)	hslV	4431168..4431698 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L6L71_RS21285 (L6L71_21245)	hslU	4431708..4433039 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
L6L71_RS21290 (L6L71_21250)	menA	4433106..4434032 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L6L71_RS21295 (L6L71_21255)	rraA	4434125..4434610 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L6L71_RS21300 (L6L71_21260)	zapB	4434695..4434940 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=562492 L6L71_RS21270 WP_000644904.1 4428999..4430024(+) (cytR) [Escherichia coli strain KFu023]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=562492 L6L71_RS21270 WP_000644904.1 4428999..4430024(+) (cytR) [Escherichia coli strain KFu023]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628