Detailed information NTG0056212

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: SAJPND1_RS03855
• Genome accession: NZ_AP014652
• Coordinates: 784219..785301 (+)
• Length: 360 a.a.
• NCBI ID: WP_001548033.1
• Uniprot ID: A0A0H2XJ41
• Organism: Staphylococcus aureus strain TMUS2126
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 779219..790301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAJPND1_RS03835 (AXW71_RS03790)	-	779596..780666 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
SAJPND1_RS03840 (AXW71_RS03795)	-	780984..782039 (+)	1056	WP_000258150.1	MraY family glycosyltransferase	-
SAJPND1_RS03845 (AXW71_RS03800)	-	782204..782845 (-)	642	WP_000192949.1	YigZ family protein	-
SAJPND1_RS03850 (AXW71_RS03805)	fakB1	782989..783855 (+)	867	WP_000686343.1	fatty acid kinase binding subunit FakB1	-
SAJPND1_RS03855 (AXW71_RS03810)	comFA	784219..785301 (+)	1083	WP_001548033.1	DEAD/DEAH box helicase	Machinery gene
SAJPND1_RS03860 (AXW71_RS03815)	-	785294..785968 (+)	675	WP_001057965.1	ComF family protein	-
SAJPND1_RS03865 (AXW71_RS03820)	raiA	786029..786601 (+)	573	WP_000617735.1	ribosome-associated translation inhibitor RaiA	-
SAJPND1_RS03870 (AXW71_RS03825)	secA	787015..789546 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
SAJPND1_RS03875 (AXW71_RS03830)	-	789588..789692 (+)	105	WP_001790092.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42111.65 Da
• Isoelectric Point: 9.8307

>NTDB_id=56212 SAJPND1_RS03855 WP_001548033.1 784219..785301(+) (comFA) [Staphylococcus aureus strain TMUS2126]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRKRQTILLYAVTGAGKTEMMFQGIQYARIQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSRQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKNLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNKKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=56212 SAJPND1_RS03855 WP_001548033.1 784219..785301(+) (comFA) [Staphylococcus aureus strain TMUS2126]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAAAGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGAATACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGACAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAATCTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACAATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAAGAAGATTCAGA
AAATGTTATACCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTCCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAG
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

3D structure

• AlphaFold DB: A0A0H2XJ41

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367