Detailed information NTG0561980

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L6D13_RS01205
• Genome accession: NZ_CP091534
• Coordinates: 254082..255065 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 537-20
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 249082..260065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6D13_RS01190 (L6D13_01190)	dppA	250225..251832 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
L6D13_RS01195 (L6D13_01195)	dppB	252140..253159 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
L6D13_RS01200 (L6D13_01200)	dppC	253169..254071 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L6D13_RS01205 (L6D13_01205)	amiE	254082..255065 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
L6D13_RS01210 (L6D13_01210)	dppF	255062..256066 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L6D13_RS01215 (L6D13_01215)	yhjV	256096..257367 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
L6D13_RS01220 (L6D13_01220)	-	257843..257950 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6D13_RS01225 (L6D13_01225)	-	258326..258433 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6D13_RS01230 (L6D13_01230)	-	258809..258916 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6D13_RS01235 (L6D13_01235)	-	259292..259399 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L6D13_RS01240 (L6D13_01240)	-	259775..259882 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=561980 L6D13_RS01205 WP_001196486.1 254082..255065(+) (amiE) [Escherichia coli strain 537-20]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=561980 L6D13_RS01205 WP_001196486.1 254082..255065(+) (amiE) [Escherichia coli strain 537-20]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404