Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KFV31_RS11640 Genome accession   NZ_CP073890
Coordinates   2336243..2336908 (-) Length   221 a.a.
NCBI ID   WP_001830679.1    Uniprot ID   A0A2G7HYS8
Organism   Staphylococcus epidermidis strain V1933793     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2331243..2341908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFV31_RS11620 (KFV31_11625) - 2331773..2332363 (-) 591 WP_001830621.1 DUF4064 domain-containing protein -
  KFV31_RS11625 (KFV31_11630) - 2332467..2334479 (-) 2013 WP_002456335.1 ABC transporter permease -
  KFV31_RS11630 (KFV31_11635) - 2334481..2335230 (-) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  KFV31_RS11635 (KFV31_11640) braS 2335341..2336237 (-) 897 WP_002437988.1 sensor histidine kinase Regulator
  KFV31_RS11640 (KFV31_11645) braR 2336243..2336908 (-) 666 WP_001830679.1 response regulator transcription factor Regulator
  KFV31_RS11645 (KFV31_11650) - 2336939..2337118 (-) 180 WP_001830653.1 hypothetical protein -
  KFV31_RS11650 (KFV31_11655) - 2337350..2338522 (-) 1173 WP_000195429.1 IS256-like element IS256 family transposase -
  KFV31_RS11655 (KFV31_11660) - 2339006..2340475 (+) 1470 WP_002484631.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25629.71 Da        Isoelectric Point: 5.0250

>NTDB_id=561977 KFV31_RS11640 WP_001830679.1 2336243..2336908(-) (braR) [Staphylococcus epidermidis strain V1933793]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEMRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=561977 KFV31_RS11640 WP_001830679.1 2336243..2336908(-) (braR) [Staphylococcus epidermidis strain V1933793]
ATGAAAATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
GCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCCGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATGCGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCCAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAGTGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTCGCAGTAAATATGACACGATTACGAAAAAAATTACTTTCTATCGGTGTCGATGATTTAATTGAGACAA
AGAAAAATGTAGGATATAGGGTTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792