Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   L5471_RS10120 Genome accession   NZ_CP091523
Coordinates   2054909..2055709 (-) Length   266 a.a.
NCBI ID   WP_249452160.1    Uniprot ID   -
Organism   Staphylococcus aureus strain N12HSA28     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2049909..2060709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L5471_RS10105 (L5471_10105) - 2050352..2051194 (-) 843 Protein_1953 DUF3578 domain-containing protein -
  L5471_RS10110 (L5471_10110) rlmH 2051516..2051995 (-) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  L5471_RS10115 (L5471_10115) adsA 2052363..2054681 (-) 2319 WP_000645781.1 LPXTG-anchored adenosine synthase AdsA -
  L5471_RS10120 (L5471_10120) vicX 2054909..2055709 (-) 801 WP_249452160.1 MBL fold metallo-hydrolase Regulator
  L5471_RS10125 (L5471_10125) yycI 2056098..2056886 (-) 789 WP_001104167.1 two-component system regulatory protein YycI -
  L5471_RS10130 (L5471_10130) yycH 2056887..2058221 (-) 1335 WP_001060150.1 two-component system activity regulator YycH -
  L5471_RS10135 (L5471_10135) walK 2058214..2060040 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.54 Da        Isoelectric Point: 6.3392

>NTDB_id=561872 L5471_RS10120 WP_249452160.1 2054909..2055709(-) (vicX) [Staphylococcus aureus strain N12HSA28]
MSRLIRMSVLASGSTGNATFLENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=561872 L5471_RS10120 WP_249452160.1 2054909..2055709(-) (vicX) [Staphylococcus aureus strain N12HSA28]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTTTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGTTTAGGTGTTTTAGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATATGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477