Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   LGY76_RS13765 Genome accession   NZ_CP091452
Coordinates   2822868..2823809 (-) Length   313 a.a.
NCBI ID   WP_001210787.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AB329     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2817868..2828809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LGY76_RS13750 bauB 2820179..2821147 (-) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -
  LGY76_RS13755 bauE 2821154..2821924 (-) 771 WP_000582115.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  LGY76_RS13760 bauC 2821921..2822868 (-) 948 WP_001223274.1 ferric acinetobactin ABC transporter permease subunit BauC -
  LGY76_RS13765 ceuB 2822868..2823809 (-) 942 WP_001210787.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  LGY76_RS19745 - 2823809..2823940 (-) 132 WP_001218004.1 hypothetical protein -
  LGY76_RS13770 basB 2824441..2826471 (+) 2031 WP_000939834.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  LGY76_RS13775 basA 2826542..2828389 (-) 1848 WP_000910253.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34037.17 Da        Isoelectric Point: 8.6941

>NTDB_id=561638 LGY76_RS13765 WP_001210787.1 2822868..2823809(-) (ceuB) [Acinetobacter baumannii strain AB329]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNMVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=561638 LGY76_RS13765 WP_001210787.1 2822868..2823809(-) (ceuB) [Acinetobacter baumannii strain AB329]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTGGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCACATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATATGGTTTTAG
TACCGGTAATTGGTTTGATGTACGGCAGTGTACTGAGCGCTTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCCTAGGACTTA
GTTATGCAGCTATAGCCGCTATTGGTTTAATACTGGTTGCCATTACGGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTGCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCGATTATTTATCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419