Detailed information NTG0561350

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L3Z43_RS21250
• Genome accession: NZ_CP091427
• Coordinates: 4428290..4429273 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 1000C-3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4423290..4434273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3Z43_RS21225	bcsF	4423451..4423642 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
L3Z43_RS21230	bcsG	4423639..4425318 (+)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
L3Z43_RS21235	ldrD	4425405..4425512 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
L3Z43_RS21240	yhjV	4425988..4427259 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
L3Z43_RS21245	dppF	4427289..4428293 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L3Z43_RS21250	amiE	4428290..4429273 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
L3Z43_RS21255	dppC	4429284..4430186 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L3Z43_RS21260	dppB	4430196..4431215 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
L3Z43_RS24515	-	4431379..4431489 (+)	111	Protein_4174	hypothetical protein	-
L3Z43_RS21265	dppA	4431523..4433130 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=561350 L3Z43_RS21250 WP_001196486.1 4428290..4429273(-) (amiE) [Escherichia coli strain 1000C-3]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=561350 L3Z43_RS21250 WP_001196486.1 4428290..4429273(-) (amiE) [Escherichia coli strain 1000C-3]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404