Detailed information NTG0561230

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: L3X15_RS04470
• Genome accession: NZ_CP091423
• Coordinates: 919481..920755 (+)
• Length: 424 a.a.
• NCBI ID: WP_012775180.1
• Uniprot ID: A0A0H3MUX4
• Organism: Streptococcus suis strain LSM29
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 914481..925755

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3X15_RS04460 (L3X15_04460)	-	917868..918677 (+)	810	WP_012027151.1	Cof-type HAD-IIB family hydrolase	-
L3X15_RS04465 (L3X15_04465)	-	918667..919479 (+)	813	WP_002936036.1	Cof-type HAD-IIB family hydrolase	-
L3X15_RS04470 (L3X15_04470)	pilA	919481..920755 (+)	1275	WP_012775180.1	signal recognition particle-docking protein FtsY	Machinery gene
L3X15_RS04475 (L3X15_04475)	-	920779..921336 (-)	558	WP_012027149.1	GNAT family N-acetyltransferase	-
L3X15_RS04480 (L3X15_04480)	-	921338..922012 (-)	675	WP_012027148.1	DNA alkylation repair protein	-
L3X15_RS04485 (L3X15_04485)	zwf	922212..923699 (-)	1488	WP_012027147.1	glucose-6-phosphate dehydrogenase	-
L3X15_RS04490 (L3X15_04490)	-	923778..924593 (-)	816	WP_012027146.1	TIGR03943 family putative permease subunit	-
L3X15_RS04495 (L3X15_04495)	-	924590..925495 (-)	906	WP_012027145.1	permease	-
L3X15_RS04500 (L3X15_04500)	-	925497..925643 (-)	147	WP_012027144.1	SPJ_0845 family protein	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47099.51 Da
• Isoelectric Point: 4.4431

>NTDB_id=561230 L3X15_RS04470 WP_012775180.1 919481..920755(+) (pilA) [Streptococcus suis strain LSM29]
MGLFDRLFGQKKQEEQVALVEEVEREQSASSEDTVTTEVESATQEMEKFQSEVAETELTAEQEAQKQRTLDMMAQYYAAK
EAAAARVKEAQEQGFDPAIQTKVKEEPVEEVAPVGQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
ILSDVGVQVASTLTEELRYEAKLQNAKKIDELRRVIIEKLVDIYEKDGQFSEQINFQDDLTVMLFVGVNGVGKTTSIGKL
AYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKENL
MAELEKIGRIIKRTLPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELDIPVKLIGF
GEKIDDIGEFKSEEFMRGLLEGLV

Nucleotide

• Length: 1275 bp

>NTDB_id=561230 L3X15_RS04470 WP_012775180.1 919481..920755(+) (pilA) [Streptococcus suis strain LSM29]
ATGGGATTATTTGATCGATTATTTGGACAAAAAAAACAAGAGGAGCAAGTCGCTCTTGTTGAAGAAGTGGAAAGGGAGCA
GTCGGCTTCTAGCGAAGATACAGTAACTACTGAAGTTGAGTCAGCTACTCAAGAAATGGAAAAGTTCCAGTCTGAAGTAG
CAGAGACTGAATTGACAGCCGAACAAGAAGCTCAGAAACAACGGACCTTAGACATGATGGCTCAATATTATGCAGCCAAA
GAAGCCGCTGCGGCTCGAGTGAAGGAAGCGCAGGAACAAGGCTTTGACCCTGCTATTCAAACCAAGGTCAAGGAAGAGCC
TGTTGAGGAAGTTGCTCCAGTAGGGCAAGAAAGTGAACAGGACAAGTACCAGCGTACCTTGAAAAAGACGCGTACAGGAT
TTGGGGCAAGGCTCAATGAATTCTTTGCCAATTTCCGTTCGGTTGATGAAGAATTTTTCGAAGAGTTGGAAGAAATGCTG
ATTTTGTCAGACGTAGGTGTGCAAGTTGCTTCTACGCTGACAGAGGAGCTCCGCTATGAAGCCAAGCTACAAAATGCCAA
GAAGATAGATGAACTCCGTCGTGTTATCATCGAAAAATTGGTGGATATTTACGAAAAAGACGGTCAATTCAGTGAGCAAA
TCAATTTCCAAGATGATTTGACAGTCATGCTCTTTGTCGGTGTCAACGGTGTTGGGAAGACGACGTCTATCGGTAAGTTA
GCCTACAAGTACAAGCAAGCTGGCAAGAAGGTCATGTTGGTCGCAGCGGACACCTTCCGTGCGGGTGCGGTAGCCCAGCT
GGTCGAGTGGGGTCGCCGTGTCGATGTGCCAGTAGTCACAGGACCTGAAAAGTCAGACCCAGCTAGTGTGGTTTTTGATG
GGGTAAAACGTGCCGTGGCAGAAGGCGTGGATATTCTCATGATTGATACAGCAGGTCGCTTGCAAAATAAAGAAAACCTC
ATGGCAGAGCTGGAAAAAATCGGTCGCATCATCAAACGGACCCTACCTGATGCACCGCATGAAACCCTCTTAGCACTGGA
TGCCTCCACAGGTCAAAACGCCCTCAGTCAAGCCAAGGAATTTGCAAAAATTACTCCATTGACTGGGCTAGTCTTGACCA
AGCTAGACGGTACAGCCAAGGGTGGTGTCGTTCTTGCCATCCGTCAGGAACTGGATATACCAGTTAAGCTAATTGGTTTC
GGTGAGAAAATCGATGACATCGGTGAATTCAAATCCGAAGAATTCATGCGTGGGCTATTGGAAGGATTGGTATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (221-420)

• SRP54-type protein, helical bundle domain (SRP54_N) (134-200)

3D structure

• AlphaFold DB: A0A0H3MUX4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	36.322	100	0.373