Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   L3X06_RS03870 Genome accession   NZ_CP091422
Coordinates   795126..795608 (-) Length   160 a.a.
NCBI ID   WP_012028247.1    Uniprot ID   A0A0H3MUQ1
Organism   Streptococcus suis strain LSM157     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 790126..800608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3X06_RS03845 (L3X06_03845) pheT 790435..792834 (+) 2400 WP_106474391.1 phenylalanine--tRNA ligase subunit beta -
  L3X06_RS03850 (L3X06_03850) - 792889..793155 (+) 267 WP_012775169.1 DUF2087 domain-containing protein -
  L3X06_RS03855 (L3X06_03855) - 793176..793478 (-) 303 WP_002938072.1 hypothetical protein -
  L3X06_RS03860 (L3X06_03860) - 793671..794414 (+) 744 WP_012027116.1 polyphosphate polymerase domain-containing protein -
  L3X06_RS03865 (L3X06_03865) - 794401..795078 (+) 678 WP_012027115.1 DUF4956 domain-containing protein -
  L3X06_RS03870 (L3X06_03870) mutX 795126..795608 (-) 483 WP_012028247.1 NUDIX hydrolase Machinery gene
  L3X06_RS03875 (L3X06_03875) folE 795776..796339 (+) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  L3X06_RS03880 (L3X06_03880) folP 796348..797160 (+) 813 WP_002938084.1 dihydropteroate synthase -
  L3X06_RS03885 (L3X06_03885) folB 797153..797515 (+) 363 WP_012027113.1 dihydroneopterin aldolase -
  L3X06_RS03890 (L3X06_03890) folK 797512..798000 (+) 489 WP_012027112.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  L3X06_RS03895 (L3X06_03895) - 798051..799361 (+) 1311 WP_012775168.1 GntP family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18554.91 Da        Isoelectric Point: 4.4960

>NTDB_id=561137 L3X06_RS03870 WP_012028247.1 795126..795608(-) (mutX) [Streptococcus suis strain LSM157]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=561137 L3X06_RS03870 WP_012028247.1 795126..795608(-) (mutX) [Streptococcus suis strain LSM157]
ATGACCAAGAAACCTGTCCAACTGGCTACGATTTGCTACATTGATAATGGCAAAGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAACGATGTCCACCAGGGGAAATGGATTGGGGTCGGTGGTAAGCTGGAACCCGGTGAAACACCGCAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAATTGCTTGATTATAGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MUQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.699

95.625

0.781