Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   L3I92_RS03165 Genome accession   NZ_CP091412
Coordinates   599125..599943 (+) Length   272 a.a.
NCBI ID   WP_001124427.1    Uniprot ID   -
Organism   Staphylococcus aureus strain ATR-20003     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 594125..604943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3I92_RS03140 (L3I92_000628) - 594735..595265 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  L3I92_RS03145 (L3I92_000629) yfkAB 595528..596679 (-) 1152 WP_001089602.1 radical SAM/CxCxxxxC motif protein YfkAB -
  L3I92_RS03150 (L3I92_000630) - 596903..597064 (+) 162 WP_001005407.1 SE1561 family protein -
  L3I92_RS03155 (L3I92_000631) - 597198..597713 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  L3I92_RS03160 (L3I92_000632) sgtB 598055..598864 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  L3I92_RS03165 (L3I92_000633) recX 599125..599943 (+) 819 WP_001124427.1 recombination regulator RecX Regulator
  L3I92_RS03170 (L3I92_000634) - 599921..600235 (+) 315 WP_000435806.1 YfhH family protein -
  L3I92_RS03175 (L3I92_000635) - 600250..601767 (+) 1518 WP_000535840.1 ABC transporter ATP-binding protein -
  L3I92_RS03180 (L3I92_000636) - 601776..602612 (+) 837 WP_000886472.1 hypothetical protein -
  L3I92_RS03185 (L3I92_000637) - 602873..603850 (-) 978 WP_000379095.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=561014 L3I92_RS03165 WP_001124427.1 599125..599943(+) (recX) [Staphylococcus aureus strain ATR-20003]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
LQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=561014 L3I92_RS03165 WP_001124427.1 599125..599943(+) (recX) [Staphylococcus aureus strain ATR-20003]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
TTACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCAGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993