Detailed information NTG0560869

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: KFV08_RS07380
• Genome accession: NZ_CP073805
• Coordinates: 1433384..1435777 (-)
• Length: 797 a.a.
• NCBI ID: WP_252455277.1
• Uniprot ID: -
• Organism: Macrococcoides canis strain Epi3241-OR
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1428384..1440777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFV08_RS07360 (KFV08_07355)	-	1429445..1429756 (-)	312	WP_099482913.1	DUF1292 domain-containing protein	-
KFV08_RS07365 (KFV08_07360)	ruvX	1429772..1430191 (-)	420	WP_086042803.1	Holliday junction resolvase RuvX	-
KFV08_RS07370 (KFV08_07365)	-	1430184..1430429 (-)	246	WP_226997688.1	IreB family regulatory phosphoprotein	-
KFV08_RS07375 (KFV08_07370)	alaS	1430509..1433133 (-)	2625	WP_252455275.1	alanine--tRNA ligase	-
KFV08_RS07380 (KFV08_07375)	recD2	1433384..1435777 (-)	2394	WP_252455277.1	ATP-dependent RecD-like DNA helicase	Machinery gene
KFV08_RS07385 (KFV08_07380)	-	1435780..1436439 (-)	660	WP_138071584.1	tetratricopeptide repeat protein	-
KFV08_RS07390 (KFV08_07385)	mnmA	1436539..1437654 (-)	1116	WP_252455281.1	tRNA 2-thiouridine(34) synthase MnmA	-
KFV08_RS07395 (KFV08_07390)	-	1437666..1438793 (-)	1128	WP_252455283.1	cysteine desulfurase family protein	-
KFV08_RS07400 (KFV08_07395)	-	1438966..1439961 (+)	996	WP_252455285.1	LLM class flavin-dependent oxidoreductase	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 90131.35 Da
• Isoelectric Point: 4.5632

>NTDB_id=560869 KFV08_RS07380 WP_252455277.1 1433384..1435777(-) (recD2) [Macrococcoides canis strain Epi3241-OR]
MENMTLFEQSFVKGTITRILFYNNDNFYTVLKAEVIESNEDFDDDATITGYLPQIAEGDTYTFTGKIVTHPKYGKQLQAD
KFEKDMPQSRDGIIHYLSSDLFKGVGKKTARTIVEVLGEDALNIILDDKSSLDRVPKLSDEKKDLIFNTIHDNQAIEKIM
IRLNEFGFGPQLAMKIYQFYKDDTLKVINESPYQLVMDIEGIGFNKADELAGKLGIDNNHPERLKAALVFTIEQASNQNG
HTYIPDQVLLETSFNLLTKNGSQVDPDRLVIALTELTEEHKLVEHEKNIYIPSLFYSETKAVQILHRLLNHKNQVKQFEQ
SEVLLAIGELESLFEVSYAERQKDALVTAMNSKLMILTGGPGTGKTTVVRGIVNLYAELHGLSLDYDDYDGQDYPIVVAA
PTGRASKRLQESTGLEATTIHRLIGWTRENKPDDVLETEITAKLVIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQL
PSVGPGQVFKDMIDAQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYNDRSFIPCSSSQIPEVIEKIVRSAVN
KGYDMRDIQVLAPIYRGPAGIRALNKVLQEILNPSDENKRELQFGDVYFRTGDKVLQLVNRPEDNVFNGDIGEVTGIFMA
AENALNKDVVIVDYDGSEVTYTKADLMEVTHAYCCSIHKSQGSEFPIVIMPVVNQYFRMLQKNILYTGLTRAKQSLIFCG
DVQAFNEGIKRIGNARFTSFYQFLIDYFKTDEADDTKHDNAGGNVLPFDVGEMTEDNMHLVDPMINMEGITPYDFIS

Nucleotide

• Length: 2394 bp

>NTDB_id=560869 KFV08_RS07380 WP_252455277.1 1433384..1435777(-) (recD2) [Macrococcoides canis strain Epi3241-OR]
TTGGAAAATATGACTTTGTTTGAGCAATCCTTTGTAAAAGGGACAATAACGAGAATATTATTTTATAACAATGATAATTT
CTATACTGTGCTGAAGGCAGAAGTGATTGAATCAAACGAAGATTTCGATGATGATGCTACGATTACAGGATACCTTCCGC
AAATTGCAGAAGGTGATACATATACGTTCACAGGTAAGATTGTAACGCATCCGAAGTACGGAAAGCAGTTACAGGCAGAT
AAGTTTGAGAAGGATATGCCGCAGTCTCGTGACGGTATTATTCATTATTTATCGAGTGATCTGTTTAAAGGGGTCGGTAA
GAAAACAGCGAGAACAATTGTTGAAGTACTGGGTGAAGATGCGCTAAATATTATTCTCGATGATAAAAGTAGTCTTGACA
GAGTTCCGAAGTTATCAGACGAGAAAAAAGATCTAATTTTTAATACGATACACGACAATCAGGCAATCGAGAAGATTATG
ATTCGTCTGAATGAATTTGGATTCGGTCCACAGCTTGCAATGAAAATCTATCAGTTCTATAAGGATGATACGCTGAAGGT
GATTAATGAATCCCCATATCAACTCGTGATGGATATTGAAGGTATCGGATTTAATAAGGCGGATGAACTGGCAGGGAAAC
TCGGTATCGATAACAATCACCCCGAACGTCTGAAAGCAGCGCTCGTGTTTACGATAGAGCAAGCCTCTAATCAGAATGGT
CATACATATATTCCGGACCAGGTGTTACTTGAAACGAGCTTCAATCTACTGACGAAAAATGGCAGTCAAGTCGATCCAGA
CCGTCTCGTTATCGCACTCACTGAACTGACAGAGGAACATAAGCTCGTTGAACATGAGAAGAACATCTATATCCCGAGTC
TATTCTACTCTGAAACGAAAGCTGTACAAATATTGCATCGATTATTGAATCATAAGAACCAGGTGAAACAGTTCGAACAG
TCTGAAGTATTGCTGGCAATCGGGGAACTGGAGTCACTGTTCGAAGTGAGTTATGCAGAACGACAGAAAGATGCGCTTGT
AACGGCGATGAACAGTAAACTGATGATCTTAACGGGGGGACCAGGTACAGGAAAGACGACGGTTGTGCGCGGTATTGTGA
ATTTATATGCTGAACTGCATGGGTTAAGTCTAGATTATGATGACTATGATGGGCAGGACTATCCGATTGTTGTCGCAGCA
CCAACTGGTCGTGCATCGAAACGTCTTCAGGAGTCTACAGGACTTGAAGCGACGACAATACACAGGTTAATTGGCTGGAC
GAGAGAGAATAAACCCGATGATGTACTGGAAACGGAAATTACAGCGAAGCTTGTCATTATCGATGAAATGTCGATGGTTG
ATACGTGGCTCATGTTTCAGTTGATGAAAGCTGTGCCGAATGATGCACAGATTATCTTTGTCGGTGACCAGGACCAGCTG
CCATCCGTTGGACCAGGGCAAGTGTTCAAAGACATGATAGATGCACAAATTATGCCGCAGATTGAGCTGAATGAAGTGTA
CAGGCAGCAGGAAGGTTCATCAATCGTTGAACTTGCGCACCAAATTAAGCGTAATGAACCATTTGATATTACGAAACGTT
ATAATGACAGAAGCTTTATACCGTGCTCAAGCAGTCAAATACCAGAAGTGATCGAGAAGATCGTGCGCAGTGCTGTGAAT
AAAGGGTATGACATGCGTGATATACAAGTACTCGCACCGATATATAGAGGACCAGCGGGTATACGTGCGCTGAACAAAGT
GCTGCAGGAAATATTGAATCCAAGTGATGAAAACAAGCGTGAACTACAGTTTGGTGATGTTTATTTCAGGACAGGGGACA
AAGTGCTGCAGCTTGTCAATCGACCGGAAGACAATGTATTTAACGGCGATATTGGTGAAGTGACGGGTATCTTTATGGCG
GCAGAGAACGCACTGAATAAAGATGTTGTCATTGTGGATTATGATGGGAGTGAAGTGACGTATACGAAAGCGGATTTAAT
GGAAGTTACACATGCCTACTGCTGCTCCATTCATAAATCACAAGGTTCGGAATTTCCGATTGTCATTATGCCGGTTGTCA
ATCAATACTTCAGAATGCTGCAGAAGAATATACTCTATACCGGATTAACACGCGCGAAACAGTCACTTATTTTCTGTGGA
GATGTACAGGCGTTTAATGAAGGAATAAAGCGAATCGGTAACGCAAGGTTTACAAGCTTCTATCAGTTTCTTATCGATTA
TTTTAAGACAGATGAAGCAGATGATACAAAACATGATAATGCAGGTGGTAACGTATTACCTTTCGACGTTGGTGAGATGA
CTGAAGACAATATGCATCTCGTTGATCCGATGATCAACATGGAAGGTATAACCCCCTATGATTTTATAAGTTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (338-543)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-718)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (584-653)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	51.801	100	0.523