Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KFO54_RS07935 Genome accession   NZ_CP073771
Coordinates   1675434..1676060 (+) Length   208 a.a.
NCBI ID   WP_211989354.1    Uniprot ID   -
Organism   Enterobacter hormaechei strain SH19PTE2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1670434..1681060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFO54_RS07915 (KFO54_07920) - 1670833..1672593 (-) 1761 WP_032608967.1 Lon protease family protein -
  KFO54_RS07920 (KFO54_07925) matP 1672780..1673232 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  KFO54_RS07925 (KFO54_07930) ompA 1673298..1674350 (-) 1053 WP_017694761.1 porin OmpA -
  KFO54_RS07930 (KFO54_07935) sulA 1674707..1675216 (-) 510 WP_126296706.1 SOS-induced cell division inhibitor SulA -
  KFO54_RS07935 (KFO54_07940) sxy/tfoX 1675434..1676060 (+) 627 WP_211989354.1 TfoX/Sxy family DNA transformation protein Regulator
  KFO54_RS07940 (KFO54_07945) yccS 1676017..1678179 (-) 2163 WP_211989353.1 YccS family putative transporter -
  KFO54_RS07945 (KFO54_07950) - 1678198..1678644 (-) 447 WP_003858149.1 YccF domain-containing protein -
  KFO54_RS07950 (KFO54_07955) helD 1678767..1680821 (+) 2055 WP_032657966.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24074.63 Da        Isoelectric Point: 9.2158

>NTDB_id=560603 KFO54_RS07935 WP_211989354.1 1675434..1676060(+) (sxy/tfoX) [Enterobacter hormaechei strain SH19PTE2]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEELHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=560603 KFO54_RS07935 WP_211989354.1 1675434..1676060(+) (sxy/tfoX) [Enterobacter hormaechei strain SH19PTE2]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGAGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.416

97.115

0.567