Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IOMTU433_RS05575 Genome accession   NZ_AP014649
Coordinates   1179093..1180034 (+) Length   313 a.a.
NCBI ID   WP_001159457.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain IOMTU433     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1174093..1185034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IOMTU433_RS05565 (IOMTU433_1121) basA 1174514..1176361 (+) 1848 WP_045543882.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  IOMTU433_RS05570 (IOMTU433_1122) basB 1176432..1178462 (-) 2031 WP_087486669.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  IOMTU433_RS05575 (IOMTU433_1123) ceuB 1179093..1180034 (+) 942 WP_001159457.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  IOMTU433_RS05580 (IOMTU433_1124) bauC 1180034..1180981 (+) 948 WP_045543884.1 ferric acinetobactin ABC transporter permease subunit BauC -
  IOMTU433_RS05585 (IOMTU433_1125) bauE 1180978..1181748 (+) 771 WP_000582113.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  IOMTU433_RS05590 (IOMTU433_1126) bauB 1181755..1182723 (+) 969 WP_001104131.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33979.03 Da        Isoelectric Point: 8.4665

>NTDB_id=56051 IOMTU433_RS05575 WP_001159457.1 1179093..1180034(+) (ceuB) [Acinetobacter baumannii strain IOMTU433]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=56051 IOMTU433_RS05575 WP_001159457.1 1179093..1180034(+) (ceuB) [Acinetobacter baumannii strain IOMTU433]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTGATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGCGACATTCTTGGTCGCTCAATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419

Multiple sequence alignment