Detailed information NTG0560366

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: KFF03_RS00540
• Genome accession: NZ_CP073745
• Coordinates: 114232..115527 (+)
• Length: 431 a.a.
• NCBI ID: WP_255858344.1
• Uniprot ID: A0A9J7AG24
• Organism: Bacterioplanoides sp. SCSIO 12839
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 109232..120527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFF03_RS00520 (KFF03_00520)	parC	109620..111884 (+)	2265	WP_255858340.1	DNA topoisomerase IV subunit A	-
KFF03_RS00525 (KFF03_00525)	-	111966..112796 (+)	831	WP_255858341.1	alpha/beta fold hydrolase	-
KFF03_RS00530 (KFF03_00530)	rsmD	112793..113344 (-)	552	WP_255858342.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
KFF03_RS00535 (KFF03_00535)	-	113395..114123 (-)	729	WP_255858343.1	hypothetical protein	-
KFF03_RS00540 (KFF03_00540)	pilA	114232..115527 (+)	1296	WP_255858344.1	signal recognition particle-docking protein FtsY	Machinery gene
KFF03_RS00545 (KFF03_00545)	ftsE	115553..116251 (+)	699	WP_255860798.1	cell division ATP-binding protein FtsE	-
KFF03_RS00550 (KFF03_00550)	ftsX	116238..117221 (+)	984	WP_255858345.1	permease-like cell division protein FtsX	-
KFF03_RS00555 (KFF03_00555)	rpoH	117401..118273 (+)	873	WP_255858346.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 431 a.a.
• Molecular weight: 47272.28 Da
• Isoelectric Point: 4.2696

>NTDB_id=560366 KFF03_RS00540 WP_255858344.1 114232..115527(+) (pilA) [Bacterioplanoides sp. SCSIO 12839]
MFDFFKRKKKAPEEQKPAAEQVVETQQELEATETLAVEPTEEATVDHAAGMETAVQAAEEVVAEEQALQHPESEQPEPQL
ETQSEREPETKVVESASESVTEEASDDLTFFEEAAEQQAPKEEKKKGFFGRIRDGLSKTRSGLADGLADLLLGKKEIDDD
LLEDLETQLIMADVGMEATQEIMERLTGRITRKELSDSDALFEALIEELRTMLDVAQQPLVVDSEKTPYVILMVGINGVG
KTTTIGKLAKQFQNRGKSVMLAAGDTFRAAAVEQLQVWGERNDVPVVAQHTGADSASVIFDAVEAAKSRNVDILIADTAG
RLHTKDNLMQELEKVVRVMKKLDDTAPHEVMLVLDAGTGQNAINQCKQFLQAVGVTGLTLTKLDGTAKGGIIFALAKQFE
IPVRFIGVGEGIDDLRPFNADEFTRALFKQD

Nucleotide

• Length: 1296 bp

>NTDB_id=560366 KFF03_RS00540 WP_255858344.1 114232..115527(+) (pilA) [Bacterioplanoides sp. SCSIO 12839]
ATGTTTGATTTTTTTAAGCGTAAAAAGAAAGCGCCAGAAGAACAAAAACCTGCAGCTGAGCAGGTCGTAGAAACACAGCA
AGAATTGGAAGCAACAGAAACCCTTGCTGTTGAGCCAACTGAGGAAGCGACTGTTGATCATGCCGCTGGTATGGAAACGG
CAGTGCAGGCAGCTGAAGAGGTAGTGGCGGAAGAGCAGGCCTTGCAGCACCCCGAATCAGAACAACCAGAGCCACAGCTC
GAAACTCAGTCCGAAAGAGAGCCTGAAACGAAAGTGGTGGAGTCTGCCTCAGAGTCAGTGACAGAAGAAGCCAGTGACGA
TCTGACCTTCTTTGAAGAAGCCGCAGAACAACAAGCGCCAAAAGAAGAAAAGAAAAAAGGTTTCTTTGGTCGTATTCGTG
ATGGCCTGAGTAAAACCCGCAGTGGTCTGGCGGATGGCTTAGCGGATTTACTGCTGGGTAAAAAAGAAATTGATGACGAT
CTGCTGGAAGATCTGGAAACTCAGCTGATCATGGCAGATGTGGGGATGGAAGCCACTCAGGAAATCATGGAGCGTCTGAC
CGGCCGCATTACCCGTAAAGAACTGAGCGACTCCGATGCGTTGTTTGAAGCCTTAATTGAAGAGCTGCGAACGATGCTGG
ATGTGGCACAGCAACCGCTGGTGGTCGACAGTGAAAAAACACCGTACGTGATTCTGATGGTAGGCATTAACGGTGTGGGT
AAAACCACCACCATTGGCAAGCTGGCAAAACAATTCCAGAACCGTGGCAAAAGTGTGATGCTGGCTGCCGGTGATACCTT
CCGGGCAGCGGCGGTTGAGCAGTTGCAGGTCTGGGGTGAACGTAACGATGTTCCGGTGGTTGCTCAGCATACCGGCGCAG
ATTCTGCTTCGGTGATTTTTGATGCCGTGGAAGCCGCTAAGTCTCGTAATGTGGATATTCTGATTGCCGATACCGCTGGC
CGTTTACACACCAAAGACAACCTGATGCAGGAGCTGGAAAAAGTCGTACGAGTGATGAAAAAACTCGACGACACGGCACC
GCATGAGGTGATGTTGGTATTGGATGCCGGTACCGGCCAAAACGCCATTAACCAATGTAAGCAGTTCTTGCAGGCTGTGG
GCGTCACCGGCCTGACGTTAACCAAGCTGGACGGTACCGCCAAAGGTGGCATTATCTTCGCGCTGGCGAAGCAGTTTGAG
ATTCCGGTACGCTTTATTGGTGTGGGTGAAGGTATTGATGACTTACGCCCGTTTAACGCCGATGAATTTACCCGGGCGCT
GTTCAAACAAGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (229-428)

• SRP54-type protein, helical bundle domain (SRP54_N) (144-209)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.537	100	0.497