Detailed information NTG0056021

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: C663_RS13410
• Genome accession: NC_020244
• Coordinates: 2676052..2676798 (-)
• Length: 248 a.a.
• NCBI ID: WP_015384274.1
• Uniprot ID: -
• Organism: Bacillus subtilis XF-1
• Function: processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2671052..2681798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C663_RS13385 (C663_2644)	mreC	2671458..2672330 (-)	873	WP_003222609.1	rod shape-determining protein MreC	-
C663_RS13390 (C663_2645)	mreB	2672361..2673374 (-)	1014	WP_003229650.1	cell shape-determining protein MreB	-
C663_RS13395 (C663_2646)	radC	2673466..2674161 (-)	696	WP_015384272.1	DNA repair protein RadC	-
C663_RS13400 (C663_2647)	maf	2674198..2674767 (-)	570	WP_004398496.1	Maf family nucleotide pyrophosphatase	-
C663_RS13405 (C663_2648)	spoIIB	2674920..2675918 (-)	999	WP_015384273.1	stage II sporulation protein SpoIIB	-
C663_RS13410 (C663_2649)	comC	2676052..2676798 (-)	747	WP_015384274.1	A24 family peptidase	Machinery gene
C663_RS13415 (C663_2650)	folC	2676938..2678230 (-)	1293	WP_015384275.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
C663_RS13420 (C663_2651)	valS	2678290..2680932 (-)	2643	WP_015483523.1	valine--tRNA ligase	-
C663_RS13425 (C663_2652)	-	2681380..2681571 (+)	192	WP_003222590.1	hypothetical protein	-

Sequence

Protein

• Length: 248 a.a.
• Molecular weight: 26378.00 Da
• Isoelectric Point: 9.6195

>NTDB_id=56021 C663_RS13410 WP_015384274.1 2676052..2676798(-) (comC) [Bacillus subtilis XF-1]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLIQKGKCKSCGHMISFMYPAAELVTA
CLFAAAGIRFGTSLELFPALVFISLLIIVAVTDLHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide

• Length: 747 bp

>NTDB_id=56021 C663_RS13410 WP_015384274.1 2676052..2676798(-) (comC) [Bacillus subtilis XF-1]
ATGCTATCCATTCTTTTTATCTTCGGGCTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTAATTCAAAAAGGTAAATGTAAAAGCTGCGGGCATATGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCACGTCGCTGGAACTGTTTCCCGCTCTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATCTTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTCTATTTCTGGCTGTAATT
GCCGCAATCACCCATGGAGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAGAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTATATGGAGCGGCAGCTGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTCGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (100-203)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (7-90)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Bacillus subtilis subsp. subtilis str. 168	97.984	100	0.98