Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   L2Z13_RS05480 Genome accession   NZ_CP091361
Coordinates   1098708..1099649 (-) Length   313 a.a.
NCBI ID   WP_001210791.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AB177-VUB     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1093708..1104649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z13_RS05465 (L2Z13_05465) bauB 1096019..1096987 (-) 969 WP_029424548.1 siderophore-binding periplasmic lipoprotein BauB -
  L2Z13_RS05470 (L2Z13_05470) bauE 1096994..1097764 (-) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  L2Z13_RS05475 (L2Z13_05475) bauC 1097761..1098708 (-) 948 WP_001223280.1 ferric acinetobactin ABC transporter permease subunit BauC -
  L2Z13_RS05480 (L2Z13_05480) ceuB 1098708..1099649 (-) 942 WP_001210791.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  L2Z13_RS19365 - 1099649..1099780 (-) 132 WP_001218004.1 hypothetical protein -
  L2Z13_RS05485 (L2Z13_05485) basB 1100281..1102308 (+) 2028 WP_086221445.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  L2Z13_RS05490 (L2Z13_05490) basA 1102379..1104226 (-) 1848 WP_029424550.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34007.08 Da        Isoelectric Point: 8.6941

>NTDB_id=560189 L2Z13_RS05480 WP_001210791.1 1098708..1099649(-) (ceuB) [Acinetobacter baumannii strain AB177-VUB]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=560189 L2Z13_RS05480 WP_001210791.1 1098708..1099649(-) (ceuB) [Acinetobacter baumannii strain AB177-VUB]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATTACCATTGTGCTCA
CCGGAATCGGCTTGGCGGTATGTGGTGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TTCCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTTAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419