Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | C663_RS12510 | Genome accession | NC_020244 |
| Coordinates | 2504219..2504629 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis XF-1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2499219..2509629
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C663_RS12480 (C663_2453) | - | 2499306..2499446 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| C663_RS12485 (C663_2454) | yqeF | 2499752..2500483 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| C663_RS12490 | cwlH | 2500735..2501487 (-) | 753 | WP_015483449.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| C663_RS12495 (C663_2456) | yqeD | 2501674..2502300 (+) | 627 | WP_015384137.1 | TVP38/TMEM64 family protein | - |
| C663_RS12500 (C663_2457) | gnd | 2502319..2503212 (-) | 894 | WP_015384138.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| C663_RS12505 (C663_2458) | yqeB | 2503464..2504186 (+) | 723 | WP_015384139.1 | hypothetical protein | - |
| C663_RS12510 (C663_2459) | nucA/comI | 2504219..2504629 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| C663_RS12515 (C663_2460) | sigK | 2504825..2505553 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| C663_RS20830 | - | 2505635..2505826 (-) | 192 | Protein_2524 | recombinase family protein | - |
| C663_RS20835 | - | 2505784..2505948 (-) | 165 | WP_015483452.1 | hypothetical protein | - |
| C663_RS12520 (C663_2463) | psiE | 2506489..2506905 (-) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| C663_RS12525 (C663_2464) | yrkQ | 2506951..2508249 (-) | 1299 | WP_015483453.1 | two-component system sensor histidine kinase YrkQ | - |
| C663_RS12530 (C663_2465) | yrkP | 2508236..2508931 (-) | 696 | WP_015384143.1 | two-component response regulator YrkP | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=56017 C663_RS12510 WP_009967785.1 2504219..2504629(-) (nucA/comI) [Bacillus subtilis XF-1]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=56017 C663_RS12510 WP_009967785.1 2504219..2504629(-) (nucA/comI) [Bacillus subtilis XF-1]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGTGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |