Detailed information NTG0056017

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SCSC_RS09315
• Genome accession: NZ_AP014647
• Coordinates: 1885432..1886529 (+)
• Length: 365 a.a.
• NCBI ID: WP_006270355.1
• Uniprot ID: -
• Organism: Streptococcus constellatus subsp. constellatus strain CCUG 24889
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1880432..1891529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCSC_RS09290 (SCSC_1915)	pgsA	1880902..1881441 (-)	540	WP_006270330.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SCSC_RS09295 (SCSC_1916)	rodZ	1881452..1882273 (-)	822	WP_003071635.1	cytoskeleton protein RodZ	-
SCSC_RS09300 (SCSC_1917)	-	1882332..1883627 (-)	1296	WP_003071636.1	pitrilysin family protein	-
SCSC_RS09305 (SCSC_1918)	-	1883627..1884874 (-)	1248	WP_006270362.1	pitrilysin family protein	-
SCSC_RS09310 (SCSC_1919)	yaaA	1885049..1885429 (+)	381	WP_003071640.1	S4 domain-containing protein YaaA	-
SCSC_RS09315 (SCSC_1920)	recF	1885432..1886529 (+)	1098	WP_006270355.1	DNA replication/repair protein RecF	Machinery gene
SCSC_RS09320 (SCSC_1921)	guaB	1886618..1888099 (-)	1482	WP_006270353.1	IMP dehydrogenase	-
SCSC_RS09325 (SCSC_1922)	trpS	1888237..1889262 (-)	1026	WP_006270346.1	tryptophan--tRNA ligase	-
SCSC_RS09330 (SCSC_1923)	galE	1889344..1890339 (-)	996	WP_006270326.1	UDP-glucose 4-epimerase GalE	-
SCSC_RS09335 (SCSC_1924)	-	1890359..1891048 (-)	690	WP_006270324.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42287.69 Da
• Isoelectric Point: 8.4346

>NTDB_id=56017 SCSC_RS09315 WP_006270355.1 1885432..1886529(+) (recF) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MWLKNLQIQHFRNYELTEIDFHPGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKVSGQLVKQTGK
ISLEIDLTPKGRITKVNHLKQSKLSDYIGNMNIVLFAPEDLQLIKGAPTLRRKFVDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTIDETFLTVLDDQLVEFGCRIMQHRIEFLKKLEYFGQQKHLELSNNLENLTIKYCSSIRLSDFNKLEEAFRI
ALKQSRSRDLFKKTTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNNRQ
LNLLESISQNIQTFITTTTLEHLQNMPSDIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=56017 SCSC_RS09315 WP_006270355.1 1885432..1886529(+) (recF) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGCAATTACGAGCTAACTGAAATAGACTTTCATCCTGGACTCAACAT
TTTTCTAGGTCAAAATGCTCAAGGAAAAACAAATATTTTAGAAGCTATCTATTTTCTTGCATTGACACGGAGTCATCGAA
CTCGTTCAGATAAAGATTTAATTTATTTTTCTAAAGACACCTTAAAAGTATCTGGACAACTTGTCAAGCAAACTGGAAAG
ATTTCTTTAGAGATTGACTTGACACCAAAAGGAAGAATTACAAAGGTTAATCATCTAAAACAAAGCAAATTATCAGATTA
CATTGGAAATATGAATATTGTTTTGTTTGCTCCAGAAGATTTACAATTGATTAAAGGAGCTCCAACCCTTAGACGCAAAT
TTGTTGATATAGAGTTGGGGCAAATTAAACCAATTTATTTATCTGATTTATCACATTATCATCATGTTCTAAAACAGAGA
AATACTTATTTAAAGACAGCAAAAACAATAGATGAGACTTTTTTAACTGTCTTGGATGATCAGTTAGTAGAGTTTGGTTG
CCGCATTATGCAGCATCGAATAGAATTTCTCAAAAAATTAGAATACTTTGGTCAGCAAAAACATTTGGAACTCTCAAATA
ATTTAGAAAATTTAACTATTAAATACTGCTCTTCTATTCGACTTTCAGATTTCAATAAACTAGAAGAAGCTTTTCGAATT
GCATTAAAACAAAGTCGTAGCAGAGATTTATTTAAAAAAACTACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGATATGAATGCTAATTTTGGTAGTCAAGGACAACATCGAAGCGTAGTCTTATCTCTCAAACTGGCAGAAATTG
AGCTTATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTCATGAGTGAACTTGACAATAACCGTCAA
CTTAATCTACTTGAATCTATTTCCCAAAACATCCAAACATTTATCACCACAACAACTCTAGAACATTTACAAAACATGCC
TTCTGATATTAAAATTTTCTCAATTCATGAAGGACATTTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	71.229	98.082	0.699
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	95.342	0.438