Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   L2Z14_RS13935 Genome accession   NZ_CP091360
Coordinates   2905349..2906290 (-) Length   313 a.a.
NCBI ID   WP_001210785.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AB179-VUB     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2900349..2911290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z14_RS13920 (L2Z14_13920) bauB 2902660..2903628 (-) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -
  L2Z14_RS13925 (L2Z14_13925) bauE 2903635..2904405 (-) 771 WP_000582116.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  L2Z14_RS13930 (L2Z14_13930) bauC 2904402..2905349 (-) 948 WP_001223271.1 ferric acinetobactin ABC transporter permease subunit BauC -
  L2Z14_RS13935 (L2Z14_13935) ceuB 2905349..2906290 (-) 942 WP_001210785.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  L2Z14_RS13940 (L2Z14_13940) basB 2906922..2908952 (+) 2031 WP_000939841.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  L2Z14_RS13945 (L2Z14_13945) basA 2909023..2910870 (-) 1848 WP_226200482.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33990.10 Da        Isoelectric Point: 8.6941

>NTDB_id=560156 L2Z14_RS13935 WP_001210785.1 2905349..2906290(-) (ceuB) [Acinetobacter baumannii strain AB179-VUB]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=560156 L2Z14_RS13935 WP_001210785.1 2905349..2906290(-) (ceuB) [Acinetobacter baumannii strain AB179-VUB]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCAGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419