Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | LT41_RS07375 | Genome accession | NZ_CP073712 |
| Coordinates | 1394246..1395214 (+) | Length | 322 a.a. |
| NCBI ID | WP_002872671.1 | Uniprot ID | Q0P8Q7 |
| Organism | Campylobacter jejuni strain G1 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1395894..1428351 | 1394246..1395214 | flank | 680 |
Gene organization within MGE regions
Location: 1394246..1428351
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT41_RS07375 (LT41_007375) | ceuB | 1394246..1395214 (+) | 969 | WP_002872671.1 | ABC transporter permease | Machinery gene |
| LT41_RS07380 (LT41_007380) | - | 1395207..1395716 (+) | 510 | Protein_1449 | iron chelate uptake ABC transporter family permease subunit | - |
| LT41_RS07385 (LT41_007385) | - | 1395894..1396523 (+) | 630 | WP_032584178.1 | S24 family peptidase | - |
| LT41_RS07390 (LT41_007390) | - | 1396604..1396924 (+) | 321 | WP_002865000.1 | hypothetical protein | - |
| LT41_RS07395 (LT41_007395) | - | 1396934..1397128 (+) | 195 | WP_002843339.1 | hypothetical protein | - |
| LT41_RS07400 (LT41_007400) | - | 1397208..1397495 (+) | 288 | WP_002865289.1 | hypothetical protein | - |
| LT41_RS07405 (LT41_007405) | - | 1397523..1398338 (-) | 816 | WP_032584260.1 | DNA adenine methylase | - |
| LT41_RS07410 (LT41_007410) | - | 1398440..1399408 (-) | 969 | WP_032584176.1 | phage tail protein | - |
| LT41_RS07415 (LT41_007415) | - | 1399402..1399593 (-) | 192 | WP_032584174.1 | tail protein X | - |
| LT41_RS07420 (LT41_007420) | - | 1399586..1399960 (-) | 375 | WP_002870151.1 | phage tail protein | - |
| LT41_RS07425 (LT41_007425) | - | 1399962..1401926 (-) | 1965 | WP_032584171.1 | phage tail tape measure protein | - |
| LT41_RS07430 (LT41_007430) | - | 1401956..1402186 (+) | 231 | WP_032584169.1 | hypothetical protein | - |
| LT41_RS07435 (LT41_007435) | - | 1402294..1402530 (-) | 237 | WP_002789979.1 | phage tail assembly protein | - |
| LT41_RS07440 (LT41_007440) | - | 1402541..1403056 (-) | 516 | WP_032584167.1 | phage major tail tube protein | - |
| LT41_RS07445 (LT41_007445) | - | 1403203..1404393 (-) | 1191 | WP_212210980.1 | phage tail sheath family protein | - |
| LT41_RS07450 (LT41_007450) | - | 1404404..1405417 (-) | 1014 | WP_032584253.1 | hypothetical protein | - |
| LT41_RS07455 (LT41_007455) | - | 1405517..1405888 (-) | 372 | WP_002938257.1 | DUF1353 domain-containing protein | - |
| LT41_RS07460 (LT41_007460) | - | 1405885..1406391 (-) | 507 | WP_032584251.1 | DUF4376 domain-containing protein | - |
| LT41_RS07465 (LT41_007465) | - | 1406416..1407447 (-) | 1032 | WP_032584249.1 | phage tail protein | - |
| LT41_RS07470 (LT41_007470) | - | 1407447..1408067 (-) | 621 | WP_002878911.1 | phage tail protein I | - |
| LT41_RS07475 (LT41_007475) | - | 1408064..1409230 (-) | 1167 | WP_032584246.1 | baseplate J/gp47 family protein | - |
| LT41_RS07480 (LT41_007480) | - | 1409227..1409517 (-) | 291 | WP_002795239.1 | GPW/gp25 family protein | - |
| LT41_RS07485 (LT41_007485) | - | 1409514..1409705 (-) | 192 | WP_002795238.1 | hypothetical protein | - |
| LT41_RS07490 (LT41_007490) | - | 1409714..1410346 (-) | 633 | WP_032584244.1 | phage baseplate assembly protein V | - |
| LT41_RS07495 (LT41_007495) | - | 1410343..1410807 (-) | 465 | WP_002865847.1 | DUF1804 family protein | - |
| LT41_RS07500 (LT41_007500) | - | 1410938..1411978 (+) | 1041 | WP_002790001.1 | phage protease | - |
| LT41_RS07505 (LT41_007505) | - | 1411978..1412865 (+) | 888 | WP_002790002.1 | Mu-like prophage major head subunit gpT family protein | - |
| LT41_RS07510 (LT41_007510) | - | 1412865..1413134 (+) | 270 | WP_019108985.1 | hypothetical protein | - |
| LT41_RS07515 (LT41_007515) | - | 1413131..1413484 (+) | 354 | WP_002790896.1 | hypothetical protein | - |
| LT41_RS07520 (LT41_007520) | - | 1413614..1413979 (+) | 366 | WP_002790266.1 | hypothetical protein | - |
| LT41_RS07525 (LT41_007525) | - | 1413969..1414358 (+) | 390 | WP_002922136.1 | D-Ala-D-Ala carboxypeptidase family metallohydrolase | - |
| LT41_RS07530 (LT41_007530) | - | 1414369..1414710 (+) | 342 | WP_002854893.1 | hypothetical protein | - |
| LT41_RS07535 (LT41_007535) | - | 1414707..1414955 (+) | 249 | WP_002784496.1 | hypothetical protein | - |
| LT41_RS07540 (LT41_007540) | - | 1415067..1415381 (+) | 315 | WP_002790261.1 | phage holin family protein | - |
| LT41_RS07545 (LT41_007545) | terL | 1415471..1416997 (+) | 1527 | WP_002865465.1 | phage terminase large subunit | - |
| LT41_RS07550 (LT41_007550) | - | 1416994..1418376 (+) | 1383 | WP_002870186.1 | DUF935 family protein | - |
| LT41_RS07555 (LT41_007555) | - | 1418369..1419502 (+) | 1134 | WP_002870187.1 | phage minor head protein | - |
| LT41_RS07560 (LT41_007560) | - | 1419641..1420120 (-) | 480 | WP_021358121.1 | phage virion morphogenesis protein | - |
| LT41_RS07565 (LT41_007565) | - | 1420107..1420298 (-) | 192 | WP_021358120.1 | hypothetical protein | - |
| LT41_RS07570 (LT41_007570) | - | 1420350..1420778 (-) | 429 | WP_002790255.1 | hypothetical protein | - |
| LT41_RS07575 (LT41_007575) | - | 1420775..1420954 (-) | 180 | WP_002864977.1 | hypothetical protein | - |
| LT41_RS07580 (LT41_007580) | - | 1421069..1421455 (-) | 387 | WP_032584068.1 | YopX family protein | - |
| LT41_RS07585 (LT41_007585) | - | 1421452..1421724 (-) | 273 | WP_002791414.1 | hypothetical protein | - |
| LT41_RS07590 (LT41_007590) | - | 1421788..1421967 (-) | 180 | WP_002791416.1 | hypothetical protein | - |
| LT41_RS07595 (LT41_007595) | - | 1421964..1422449 (-) | 486 | WP_002806832.1 | host-nuclease inhibitor Gam family protein | - |
| LT41_RS07600 (LT41_007600) | - | 1422644..1422982 (-) | 339 | WP_032584063.1 | DUF4406 domain-containing protein | - |
| LT41_RS07605 (LT41_007605) | - | 1423056..1423487 (-) | 432 | WP_002865075.1 | SA1788 family PVL leukocidin-associated protein | - |
| LT41_RS07610 (LT41_007610) | - | 1423542..1423727 (-) | 186 | WP_002824157.1 | hypothetical protein | - |
| LT41_RS07615 (LT41_007615) | - | 1423724..1423915 (-) | 192 | WP_002795448.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LT41_RS07620 (LT41_007620) | - | 1423912..1424769 (-) | 858 | WP_002790751.1 | AAA family ATPase | - |
| LT41_RS07625 (LT41_007625) | - | 1424858..1426972 (-) | 2115 | WP_032584061.1 | Mu transposase C-terminal domain-containing protein | - |
| LT41_RS07630 (LT41_007630) | - | 1426973..1427164 (-) | 192 | WP_002876364.1 | hypothetical protein | - |
| LT41_RS07635 (LT41_007635) | - | 1427180..1427449 (-) | 270 | WP_032584059.1 | hypothetical protein | - |
| LT41_RS07640 (LT41_007640) | - | 1427548..1428351 (+) | 804 | WP_002938466.1 | S24 family peptidase | - |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 35469.40 Da Isoelectric Point: 9.6678
>NTDB_id=560097 LT41_RS07375 WP_002872671.1 1394246..1395214(+) (ceuB) [Campylobacter jejuni strain G1]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA
Nucleotide
Download Length: 969 bp
>NTDB_id=560097 LT41_RS07375 WP_002872671.1 1394246..1395214(+) (ceuB) [Campylobacter jejuni strain G1]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
99.068 |
100 |
0.991 |