Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C663_RS07640 Genome accession   NC_020244
Coordinates   1492350..1492925 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis XF-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1487350..1497925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C663_RS07610 (C663_1460) dapD 1487538..1488248 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C663_RS07615 (C663_1461) dapI 1488318..1489442 (+) 1125 WP_015383541.1 N-acetyldiaminopimelate deacetylase -
  C663_RS07620 (C663_1462) ykuS 1489504..1489749 (+) 246 WP_003232382.1 YkuS family protein -
  C663_RS07625 (C663_1463) mscT 1489786..1490589 (-) 804 WP_041517839.1 small-conductance mechanosensitive channel protein MscT -
  C663_RS07630 (C663_1464) ahpA 1490826..1491368 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C663_RS07635 (C663_1465) ykuV 1491438..1491884 (+) 447 WP_015483177.1 thiol-disulfide oxidoreductase YkuV -
  C663_RS07640 (C663_1466) rok 1492350..1492925 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  C663_RS07645 (C663_1467) cse15 1492966..1493931 (-) 966 WP_015383544.1 spore protein Cse15 -
  C663_RS07650 (C663_1468) mobA 1494068..1494667 (+) 600 WP_015383545.1 molybdenum cofactor guanylyltransferase -
  C663_RS07655 (C663_1469) moeB 1494718..1495737 (+) 1020 WP_015383546.1 molybdopterin-synthase adenylyltransferase MoeB -
  C663_RS07660 (C663_1470) glp 1495755..1497047 (+) 1293 WP_015383547.1 gephyrin-like molybdotransferase Glp -
  C663_RS07665 mobB 1497008..1497529 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=55997 C663_RS07640 WP_003232378.1 1492350..1492925(+) (rok) [Bacillus subtilis XF-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=55997 C663_RS07640 WP_003232378.1 1492350..1492925(+) (rok) [Bacillus subtilis XF-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment