Detailed information NTG0559969

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: KEC58_RS12295
• Genome accession: NZ_CP073684
• Coordinates: 2665829..2669221 (+)
• Length: 1130 a.a.
• NCBI ID: WP_284632178.1
• Uniprot ID: -
• Organism: Photobacterium damselae strain Pdd1605
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2660829..2674221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEC58_RS12280 (KEC58_12250)	hemL	2661541..2662833 (+)	1293	WP_005301305.1	glutamate-1-semialdehyde 2,1-aminomutase	-
KEC58_RS12285 (KEC58_12255)	-	2663208..2664296 (+)	1089	WP_109375285.1	AI-2E family transporter	-
KEC58_RS12290 (KEC58_12260)	rsmC	2664496..2665515 (+)	1020	WP_005301311.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
KEC58_RS12295 (KEC58_12265)	chiS	2665829..2669221 (+)	3393	WP_284632178.1	response regulator	Regulator
KEC58_RS12300 (KEC58_12270)	-	2669922..2671598 (+)	1677	WP_068946919.1	ABC transporter substrate-binding protein	-
KEC58_RS12305 (KEC58_12275)	-	2671745..2672731 (+)	987	WP_065172285.1	ABC transporter permease	-
KEC58_RS12310 (KEC58_12280)	-	2672734..2673759 (+)	1026	WP_106142406.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127198.31 Da
• Isoelectric Point: 6.6791

>NTDB_id=559969 KEC58_RS12295 WP_284632178.1 2665829..2669221(+) (chiS) [Photobacterium damselae strain Pdd1605]
MQTKQRFKRLQHTLMLAFLVLSITPLTLSALYFLNSHSKDLAEQSTSHLASLLENKKKQLSQFFAAKESEVQSFARSELA
NASGGRFYGLVGAYHQLGNINNLLNGLTREQYFKEILTAKGQKSTTNSASYVGHERYRLMYKRYNWAFDEYLKRSDFSDI
LLVDLKGNVVYSAKKPQYFALNLASGKGALKGLQPTFQAISTQAQQLKQDQEVVPVAFADFNLGGNNQSEQAWFAAPIIQ
QGYLHSYVFFQLDINKIATLLADKPQNGQTVQTLLVGQDHHMRLPNSGDLPQQLISPAINQALAGKTGVGSLLNYNNIAV
LSAFTPIKIFNHTWALVVELPEKEAFARIHQLEKIFFAAMLTAIVLVILAALWLSNSITAPLLRLTWASERVSAGDLEQK
IEGTERKDEIGRLATSFARMQCSIREKMSLISKQNQELEKNIHVIKQQNDDLQTADKLKDEFLATTSHELRTPLHGMIGI
AESLLAGANGPMQGAQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIDKHAVDLASAVRLVLELSSHLLGTKPVRII
NQIPADLPLVQADEQRLEQVLYNLVGNAIKYTSEGKIVLSATVLENQVRIQVVDTGQGIPAEQLEHIFEPLVQANTNHAN
YRQGAGLGLTISRQLLELMGGRLYVSSQPMVGTTFSFTLNIASDEQIRQSHDHGKIHHFQAPLCDATPIEMANLPENLNG
ELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPALILLDIMMPEMSGYEVCSQLRQQYTPLELPIMML
SALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAHLQAGKTEFEREKNRQLAQEIQQRKQVELSLLETQTRLLGLLES
TTEAILCIQNSGRIRYANDAAAKLFKRTPEQLERHSIDELLLTHLPDELQNNHHYSGSLCFKIGEQQQNLATDILNLPEE
SGLKQMFIFGNSGPSPQQRVQMLEEAIDVLSSYAFDGDKDNLQQLRELGGEFTRLADKLGNDAPNKQDILRELLVDAMRT
TLEVWEQDTKKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVISTIDYVLDKGSAQNIQHQQLSQMR
DKLQNLLRAS

Nucleotide

• Length: 3393 bp

>NTDB_id=559969 KEC58_RS12295 WP_284632178.1 2665829..2669221(+) (chiS) [Photobacterium damselae strain Pdd1605]
ATGCAAACAAAACAACGATTTAAACGTCTTCAGCATACATTAATGCTGGCTTTTCTTGTTCTTAGTATTACGCCATTAAC
TCTCTCCGCACTATATTTCCTCAACTCACACTCCAAGGATTTGGCAGAGCAAAGCACATCGCATTTGGCGTCTCTTCTTG
AGAATAAGAAAAAACAACTAAGCCAATTTTTTGCGGCTAAAGAGTCTGAGGTGCAAAGTTTTGCTCGATCAGAGCTTGCT
AATGCCAGTGGTGGCCGCTTCTATGGGTTAGTAGGGGCTTACCATCAATTAGGTAATATCAATAACCTGTTAAATGGCCT
GACGCGAGAACAGTATTTTAAAGAGATTCTCACGGCAAAAGGGCAAAAAAGTACCACCAACAGTGCCAGTTATGTCGGCC
ATGAGCGCTATCGTTTAATGTATAAGCGTTATAACTGGGCATTTGATGAATATCTTAAGCGCTCAGATTTTAGTGATATC
TTATTGGTTGATTTAAAAGGTAACGTGGTCTATTCCGCGAAAAAACCACAGTACTTTGCTTTAAATCTTGCTTCAGGCAA
GGGGGCCTTAAAAGGGTTACAACCAACTTTCCAAGCCATTAGCACTCAAGCTCAACAGCTAAAACAAGACCAAGAAGTCG
TCCCCGTTGCTTTTGCCGATTTTAACCTAGGAGGCAATAATCAGTCAGAACAAGCCTGGTTTGCCGCCCCAATCATTCAG
CAAGGGTATTTACACAGCTACGTATTTTTCCAGCTCGATATCAATAAAATCGCAACCTTACTGGCCGATAAACCGCAAAA
TGGACAAACGGTTCAAACTCTATTGGTAGGCCAAGATCATCACATGCGCTTACCCAATAGTGGAGATTTGCCACAACAAT
TAATCAGCCCAGCCATCAACCAAGCACTTGCTGGTAAAACTGGGGTAGGCAGTTTACTTAACTACAATAATATTGCCGTA
CTCAGTGCCTTTACTCCGATTAAAATCTTTAACCACACCTGGGCATTGGTAGTTGAATTACCCGAAAAAGAAGCATTTGC
TCGTATTCATCAACTCGAAAAAATCTTTTTTGCAGCCATGCTTACTGCCATCGTATTAGTGATTTTAGCCGCTCTTTGGT
TATCAAACTCAATAACGGCTCCCCTATTACGCTTAACTTGGGCATCGGAGCGAGTCTCTGCAGGCGATCTAGAGCAAAAA
ATCGAAGGAACAGAACGTAAAGATGAAATTGGCCGTCTTGCCACTAGCTTTGCTCGAATGCAATGTTCTATTCGGGAAAA
GATGAGTTTGATTAGCAAGCAAAATCAAGAACTTGAAAAAAATATTCACGTGATCAAACAACAAAATGATGATCTGCAAA
CCGCCGACAAACTAAAAGATGAGTTCTTAGCGACGACCTCACATGAGTTGCGCACCCCTCTTCACGGTATGATTGGGATA
GCCGAATCCTTACTTGCTGGAGCAAATGGGCCAATGCAAGGAGCCCAACGCCGTCAATTGGAAATGTTGATCAACAGTGG
TCAGCGTCTAACAAACTTAGTTGATGATTTACTCGATTATCACAAAATGCGTTATGGCGATCTCGATATTGATAAACATG
CAGTCGATCTTGCCAGCGCTGTTCGGTTAGTCCTTGAATTATCAAGCCATTTATTGGGAACCAAACCAGTTCGAATCATT
AACCAAATACCCGCTGATTTACCTTTAGTTCAAGCCGATGAGCAACGCCTAGAGCAAGTGCTGTATAACTTGGTTGGTAA
TGCAATCAAATATACCTCTGAAGGTAAGATTGTGCTTTCTGCAACAGTATTGGAAAACCAAGTTCGCATTCAAGTGGTTG
ATACAGGGCAAGGAATTCCGGCAGAACAACTTGAACATATCTTTGAACCACTGGTACAAGCCAACACCAATCATGCTAAC
TATCGTCAAGGAGCAGGCCTTGGTTTAACCATTAGCCGTCAATTACTGGAGTTAATGGGTGGTCGCCTGTACGTCAGCAG
TCAGCCAATGGTGGGAACCACTTTTAGTTTCACCCTAAACATCGCCTCCGACGAACAAATTCGCCAAAGCCATGATCACG
GTAAAATTCATCACTTCCAAGCTCCATTGTGTGATGCCACTCCGATTGAAATGGCAAATTTACCTGAAAACTTAAATGGT
GAACTACTACTCGTGGTTGATGATGAACCCGTTAATCTTCAGATACTCAATAACTTCCTAAGACTTGAAGGGTATAGAGT
TCTCACTGCAGAAAGCGGAAAACAGGCCCTTGAGTTAGTACAAAGCCACAAACCTGCACTGATTTTGCTCGATATTATGA
TGCCAGAAATGAGTGGTTATGAGGTTTGTAGTCAATTGCGCCAACAATATACCCCATTAGAACTACCGATCATGATGCTA
TCTGCATTGGGGCAAGTTAAAGATCGCGTTAAAGGCTTTGAATGCGGCGCCAATGATTACCTAACAAAACCTTTTAATAA
AGAAGAGCTTACCGCACGTATAAAAGCCCATCTTCAAGCGGGAAAAACTGAATTTGAGCGAGAAAAAAATCGTCAATTAG
CTCAAGAAATTCAACAACGTAAGCAAGTTGAGTTAAGTTTACTTGAGACCCAAACTCGATTACTTGGCCTATTAGAATCC
ACCACCGAAGCCATTTTATGTATTCAAAATAGTGGGCGAATTCGTTATGCCAATGACGCTGCGGCTAAGTTATTTAAACG
CACCCCAGAACAATTGGAGCGCCACTCTATCGATGAACTACTGCTAACCCACCTACCTGATGAGTTACAAAATAATCATC
ATTACAGTGGTTCACTGTGTTTCAAAATTGGCGAACAGCAACAAAATCTGGCTACCGATATCCTCAATTTGCCAGAAGAG
TCTGGACTTAAGCAGATGTTTATCTTCGGCAATAGCGGGCCATCGCCACAGCAACGAGTACAAATGCTCGAAGAAGCTAT
TGATGTTTTATCGAGCTATGCTTTTGATGGTGACAAAGACAACTTACAACAATTGCGTGAGCTAGGTGGAGAATTCACCA
GACTGGCAGACAAATTGGGTAATGATGCCCCTAATAAACAAGATATTTTGCGCGAATTGCTGGTTGATGCCATGCGAACA
ACACTTGAGGTTTGGGAGCAAGATACGAAAAAAACCAAGTTTGATTTAGCCGAAGAGAGTGGATTATGGCGTGTTTATCT
CGATCGCAGTACGCTACAAACTCGCACCTTAGATAAATATCTCCATGTTGAGACTCTTCCTAAAACGCCGCGTTGGCGCA
CGGTTATTAGCACCATAGACTATGTTCTTGATAAAGGCAGTGCTCAAAATATCCAACATCAACAGCTGAGCCAGATGCGA
GATAAATTGCAGAACTTATTACGAGCAAGTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (724-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (373-421)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.938	100	0.589