Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   C663_RS06250 Genome accession   NC_020244
Coordinates   1233066..1233722 (+) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis XF-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1228066..1238722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C663_RS06225 (C663_1174) oppF 1228535..1229452 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  C663_RS06230 (C663_1175) yjbB 1229558..1230775 (+) 1218 WP_080030656.1 MFS transporter -
  C663_RS06235 (C663_1176) yjbC 1230939..1231514 (+) 576 WP_015383352.1 GNAT family N-acetyltransferase -
  C663_RS06240 (C663_1177) spx 1231695..1232090 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  C663_RS06245 (C663_1178) yjbE 1232133..1232789 (-) 657 WP_015383353.1 TerC family protein -
  C663_RS21235 - 1232959..1233099 (+) 141 WP_119122854.1 hypothetical protein -
  C663_RS06250 (C663_1179) mecA 1233066..1233722 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  C663_RS21240 - 1233717..1233842 (-) 126 Protein_1223 hypothetical protein -
  C663_RS06255 (C663_1180) coiA 1233886..1235037 (+) 1152 WP_015483087.1 competence protein CoiA Machinery gene
  C663_RS06260 (C663_1181) pepF 1235267..1237096 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  C663_RS20535 (C663_1182) - 1237134..1237301 (-) 168 WP_003244944.1 hypothetical protein -
  C663_RS06270 (C663_1183) spxH 1237616..1238515 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=55991 C663_RS06250 WP_015383354.1 1233066..1233722(+) (mecA) [Bacillus subtilis XF-1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=55991 C663_RS06250 WP_015383354.1 1233066..1233722(+) (mecA) [Bacillus subtilis XF-1]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCTGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995

Multiple sequence alignment