Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KDB76_RS26395 Genome accession   NZ_CP073661
Coordinates   5741937..5742338 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas sp. JS425     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5736937..5747338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KDB76_RS26380 (KDB76_26380) - 5738907..5740931 (-) 2025 WP_230491512.1 methyl-accepting chemotaxis protein -
  KDB76_RS26385 (KDB76_26385) - 5740973..5741527 (-) 555 WP_003257767.1 chemotaxis protein CheW -
  KDB76_RS26390 (KDB76_26390) pilH 5741524..5741889 (-) 366 WP_003257768.1 twitching motility response regulator PilH -
  KDB76_RS26395 (KDB76_26395) pilG 5741937..5742338 (-) 402 WP_003257770.1 response regulator Regulator
  KDB76_RS26400 (KDB76_26400) gshB 5742551..5743504 (+) 954 WP_013974527.1 glutathione synthase -
  KDB76_RS26405 (KDB76_26405) - 5743596..5744501 (+) 906 WP_013974528.1 energy transducer TonB -
  KDB76_RS26410 (KDB76_26410) - 5744673..5745242 (+) 570 WP_013974529.1 YqgE/AlgH family protein -
  KDB76_RS26415 (KDB76_26415) ruvX 5745242..5745679 (+) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  KDB76_RS26420 (KDB76_26420) pyrR 5745729..5746247 (+) 519 WP_003257772.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KDB76_RS26425 (KDB76_26425) - 5746260..5747264 (+) 1005 WP_013974531.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=559810 KDB76_RS26395 WP_003257770.1 5741937..5742338(-) (pilG) [Pseudomonas sp. JS425]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=559810 KDB76_RS26395 WP_003257770.1 5741937..5742338(-) (pilG) [Pseudomonas sp. JS425]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCGCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCGCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TCGATGTGTTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTTTCGTCACGTGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632