Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C663_RS02105 Genome accession   NC_020244
Coordinates   425655..426605 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis XF-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 420655..431605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C663_RS02085 (C663_0370) rapC 422113..423261 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  C663_RS20295 phrC 423245..423369 (+) 125 Protein_376 phosphatase RapC inhibitor PhrC -
  C663_RS20300 (C663_0371) yczM 423469..423558 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  C663_RS20305 yczN 423640..423753 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  C663_RS02100 (C663_0372) thrD 423906..425270 (-) 1365 WP_015382767.1 aspartate kinase -
  C663_RS02105 (C663_0373) ceuB 425655..426605 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  C663_RS02110 (C663_0374) yclO 426598..427578 (+) 981 WP_041517655.1 petrobactin ABC transporter permease YclO -
  C663_RS02115 (C663_0375) yclP 427572..428330 (+) 759 WP_015382770.1 petrobactin ABC transporter ATP-binding protein YclP -
  C663_RS02120 (C663_0376) yclQ 428352..429305 (+) 954 WP_015482797.1 petrobactin ABC transporter substrate-binding protein YclQ -
  C663_RS02125 (C663_0377) ycnB 429352..430770 (-) 1419 WP_015382772.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=55977 C663_RS02105 WP_015382768.1 425655..426605(+) (ceuB) [Bacillus subtilis XF-1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=55977 C663_RS02105 WP_015382768.1 425655..426605(+) (ceuB) [Bacillus subtilis XF-1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTTTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAACAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCC
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GATTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTAGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment