Detailed information NTG0559762

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KEC47_RS16425
• Genome accession: NZ_CP073656
• Coordinates: 3387859..3389022 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Y816
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3382859..3394022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEC47_RS16395 (KEC47_16395)	-	3383124..3383543 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
KEC47_RS16400 (KEC47_16400)	comFC	3383617..3384306 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
KEC47_RS16405 (KEC47_16405)	-	3384312..3384596 (-)	285	WP_017418816.1	competence protein ComFB	-
KEC47_RS16410 (KEC47_16410)	comFA	3384654..3386039 (-)	1386	WP_176283561.1	DEAD/DEAH box helicase	Machinery gene
KEC47_RS16415 (KEC47_16415)	-	3386147..3386995 (-)	849	WP_003151387.1	DegV family protein	-
KEC47_RS16420 (KEC47_16420)	degU	3387093..3387782 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KEC47_RS16425 (KEC47_16425)	degS	3387859..3389022 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
KEC47_RS16430 (KEC47_16430)	-	3389245..3389892 (+)	648	WP_060657503.1	YigZ family protein	-
KEC47_RS16435 (KEC47_16435)	-	3389897..3391072 (+)	1176	WP_176283562.1	LCP family protein	-
KEC47_RS16440 (KEC47_16440)	-	3391162..3392238 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
KEC47_RS16445 (KEC47_16445)	-	3392371..3393567 (-)	1197	WP_070082461.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=559762 KEC47_RS16425 WP_003151385.1 3387859..3389022(-) (degS) [Bacillus velezensis strain Y816]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=559762 KEC47_RS16425 WP_003151385.1 3387859..3389022(-) (degS) [Bacillus velezensis strain Y816]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948