Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KEC47_RS06870 Genome accession   NZ_CP073656
Coordinates   1361780..1362244 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain Y816     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1356780..1367244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEC47_RS06850 (KEC47_06850) - 1357260..1359080 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  KEC47_RS06855 (KEC47_06855) - 1359106..1360275 (-) 1170 WP_007611083.1 aminotransferase A -
  KEC47_RS06860 (KEC47_06860) - 1360476..1360637 (-) 162 WP_003154625.1 hypothetical protein -
  KEC47_RS06865 (KEC47_06865) cheV 1360826..1361737 (+) 912 WP_003154623.1 chemotaxis protein CheV -
  KEC47_RS06870 (KEC47_06870) kre 1361780..1362244 (-) 465 WP_003154622.1 YkyB family protein Regulator
  KEC47_RS06875 (KEC47_06875) - 1362367..1363659 (-) 1293 WP_003154621.1 MFS transporter -
  KEC47_RS06880 (KEC47_06880) - 1363735..1364229 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  KEC47_RS06885 (KEC47_06885) - 1364304..1365167 (-) 864 WP_146276666.1 metallophosphoesterase -
  KEC47_RS06890 (KEC47_06890) fadH 1365309..1366072 (+) 764 Protein_1311 2,4-dienoyl-CoA reductase -
  KEC47_RS19185 - 1366183..1366731 (+) 549 Protein_1312 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=559723 KEC47_RS06870 WP_003154622.1 1361780..1362244(-) (kre) [Bacillus velezensis strain Y816]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=559723 KEC47_RS06870 WP_003154622.1 1361780..1362244(-) (kre) [Bacillus velezensis strain Y816]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929