Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C663_RS00250 | Genome accession | NC_020244 |
| Coordinates | 46094..46384 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis XF-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 41094..51384
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C663_RS00210 (C663_0030) | darA | 41117..41446 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| C663_RS00215 (C663_0031) | yaaR | 41459..41899 (+) | 441 | WP_015382556.1 | YaaR family protein | - |
| C663_RS00220 (C663_0032) | holB | 41911..42900 (+) | 990 | WP_015382557.1 | DNA polymerase III subunit delta' | - |
| C663_RS00225 (C663_0033) | ricT | 42903..43730 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| C663_RS00230 (C663_0034) | yabA | 43745..44104 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| C663_RS00235 (C663_0035) | trmNF | 44163..44906 (+) | 744 | WP_015382558.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C663_RS00240 (C663_0036) | yazA | 44893..45192 (+) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| C663_RS00245 (C663_0037) | rsmI | 45167..46045 (+) | 879 | WP_041517603.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C663_RS00250 (C663_0038) | abrB | 46094..46384 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C663_RS00255 (C663_0039) | metG | 46879..48873 (+) | 1995 | WP_015382561.1 | methionine--tRNA ligase | - |
| C663_RS00260 (C663_0040) | dayD | 48953..49720 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| C663_RS00265 (C663_0041) | yabE | 49876..51189 (+) | 1314 | WP_015382562.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=55970 C663_RS00250 WP_003226760.1 46094..46384(-) (abrB) [Bacillus subtilis XF-1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=55970 C663_RS00250 WP_003226760.1 46094..46384(-) (abrB) [Bacillus subtilis XF-1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |