Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SCSC_RS05315 Genome accession   NZ_AP014647
Coordinates   1073092..1073895 (-) Length   267 a.a.
NCBI ID   WP_006270665.1    Uniprot ID   -
Organism   Streptococcus constellatus subsp. constellatus strain CCUG 24889     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1068092..1078895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCSC_RS05300 (SCSC_1095) smc 1068387..1071920 (-) 3534 WP_006270675.1 chromosome segregation protein SMC -
  SCSC_RS05305 (SCSC_1096) rnc 1071911..1072609 (-) 699 WP_006270710.1 ribonuclease III -
  SCSC_RS05310 - 1072745..1073058 (-) 314 Protein_1029 YbaN family protein -
  SCSC_RS05315 (SCSC_1098) vicX 1073092..1073895 (-) 804 WP_006270665.1 MBL fold metallo-hydrolase Regulator
  SCSC_RS05320 (SCSC_1099) micB 1073897..1075249 (-) 1353 WP_006270686.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SCSC_RS05325 (SCSC_1100) yycF 1075242..1075943 (-) 702 WP_003035055.1 response regulator YycF -
  SCSC_RS05330 (SCSC_1101) - 1076244..1076576 (-) 333 WP_006268722.1 hypothetical protein -
  SCSC_RS05335 (SCSC_1102) - 1076603..1077916 (-) 1314 WP_006268747.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29868.74 Da        Isoelectric Point: 5.8744

>NTDB_id=55970 SCSC_RS05315 WP_006270665.1 1073092..1073895(-) (vicX) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MNEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQDTWNAMETALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIETLRSGTYPWSLKQRILSDQGHLSNDDGAETMIRALGIRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHIYDTSPDTATPLTDI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=55970 SCSC_RS05315 WP_006270665.1 1073092..1073895(-) (vicX) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGAACGAGAAGGGATTTAAGTACAGTATTTTAGCGTCAGGTTCTACTGGCAATTGTTTCTATTTAGAAACCCCAAAGAA
GAAGTTGCTGATTGACGCCGGCTTATCTGGAAAGAAAATTACCAGTTTGCTGAGTGAAATTGATCGTAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCATGAACATAAAGACCATATTCATGGTGTGGGTGTTTTAGCACGGAAATATCATTTAGAT
ATTTATGCTAATCAAGATACTTGGAATGCTATGGAAACAGCACTTGGAAAGATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACGAAAACATTTGGTGATATTGATATTGAAAGTTTTGGGGTCAGTCATGATGCGGTTGCACCACAATTCT
ATCGATTGATGAAAGATGACAAAAGTTTTGTTTTGCTGACGGATACTGGTTATGTCAGCGATCGGATGGCAGGAATCATT
GAAAATGCAGATGGCTATTTGATTGAATCCAATCATGATATTGAAACCCTGCGCAGTGGTACTTATCCTTGGAGTTTAAA
GCAGCGAATTTTGTCTGATCAAGGACATTTGTCGAATGATGATGGTGCTGAAACTATGATTCGCGCTCTAGGGATACGGA
CAAAGAAAATCTATCTAGGACATCTCAGCAAGGAAAATAATACTAAAGAATTGGCTCATATTACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCAGTTGAGCATGATTTTCACATTTATGATACCTCACCAGATACGGCAACTCCATTGACTGATAT
TTAG

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.273

100

0.813

Multiple sequence alignment