Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KEF49_RS19575 Genome accession   NZ_CP073635
Coordinates   380134..380298 (+) Length   54 a.a.
NCBI ID   WP_269387144.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain Ba13     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 375134..385298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEF49_RS19570 srfAB 377025..380117 (+) 3093 Protein_318 surfactin non-ribosomal peptide synthetase SrfAB -
  KEF49_RS19575 comS 380134..380298 (+) 165 WP_269387144.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6236.25 Da        Isoelectric Point: 12.3302

>NTDB_id=559628 KEF49_RS19575 WP_269387144.1 380134..380298(+) (comS) [Bacillus amyloliquefaciens strain Ba13]
MRARRSSSLNRSDKRLIRSIILFPQHNAGCISSISLGRPARATTSLLYFCWRDR

Nucleotide


Download         Length: 165 bp        

>NTDB_id=559628 KEF49_RS19575 WP_269387144.1 380134..380298(+) (comS) [Bacillus amyloliquefaciens strain Ba13]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAA
CGCAGGATGTATATCCTCAATCAGCTTGGGCAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGATC
GGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

60.87

85.185

0.519