Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KEF49_RS05440 Genome accession   NZ_CP073635
Coordinates   1104362..1104553 (+) Length   63 a.a.
NCBI ID   WP_013351814.1    Uniprot ID   A0AAP7TCS9
Organism   Bacillus amyloliquefaciens strain Ba13     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1099362..1109553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEF49_RS05410 (KEF49_05410) argF 1100202..1101158 (+) 957 WP_065981158.1 ornithine carbamoyltransferase -
  KEF49_RS05415 (KEF49_05415) - 1101249..1101428 (+) 180 WP_212100903.1 YjzC family protein -
  KEF49_RS05420 (KEF49_05420) - 1101469..1101657 (-) 189 WP_013351810.1 YjzD family protein -
  KEF49_RS05425 (KEF49_05425) - 1101918..1102652 (+) 735 WP_065981159.1 hypothetical protein -
  KEF49_RS05430 (KEF49_05430) - 1102735..1103301 (+) 567 WP_212100906.1 hypothetical protein -
  KEF49_RS05435 (KEF49_05435) med 1103396..1104349 (+) 954 WP_013351813.1 BMP family ABC transporter substrate-binding protein Regulator
  KEF49_RS05440 (KEF49_05440) comZ 1104362..1104553 (+) 192 WP_013351814.1 ComZ family protein Regulator
  KEF49_RS05445 (KEF49_05445) - 1104583..1104801 (-) 219 WP_013351815.1 hypothetical protein -
  KEF49_RS05450 (KEF49_05450) - 1104967..1105905 (+) 939 WP_065981161.1 beta-ketoacyl-ACP synthase III -
  KEF49_RS05455 (KEF49_05455) fabF 1105929..1107167 (+) 1239 WP_065981162.1 beta-ketoacyl-ACP synthase II -
  KEF49_RS05460 (KEF49_05460) - 1107251..1108036 (+) 786 WP_212100909.1 DUF2268 domain-containing protein -
  KEF49_RS05465 (KEF49_05465) - 1108210..1109196 (+) 987 WP_212100912.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7202.35 Da        Isoelectric Point: 4.3344

>NTDB_id=559574 KEF49_RS05440 WP_013351814.1 1104362..1104553(+) (comZ) [Bacillus amyloliquefaciens strain Ba13]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMNLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=559574 KEF49_RS05440 WP_013351814.1 1104362..1104553(+) (comZ) [Bacillus amyloliquefaciens strain Ba13]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
AGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTCATGAACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

87.931

92.063

0.81