Detailed information NTG0559561

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KEF49_RS01960
• Genome accession: NZ_CP073635
• Coordinates: 420986..422134 (+)
• Length: 382 a.a.
• NCBI ID: WP_065980700.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Ba13
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415986..427134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEF49_RS01940 (KEF49_01940)	-	416382..417065 (-)	684	WP_212100305.1	ABC transporter ATP-binding protein	-
KEF49_RS01945 (KEF49_01945)	-	417080..418516 (-)	1437	WP_212100307.1	ABC transporter permease	-
KEF49_RS01950 (KEF49_01950)	-	418729..419412 (+)	684	WP_013351002.1	response regulator transcription factor	-
KEF49_RS01955 (KEF49_01955)	-	419399..420826 (+)	1428	WP_212100309.1	HAMP domain-containing sensor histidine kinase	-
KEF49_RS01960 (KEF49_01960)	rapC	420986..422134 (+)	1149	WP_065980700.1	tetratricopeptide repeat protein	Regulator
KEF49_RS01965 (KEF49_01965)	phrC	422118..422237 (+)	120	WP_013351005.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
KEF49_RS01970 (KEF49_01970)	-	422385..422495 (-)	111	WP_065980701.1	YjcZ family sporulation protein	-
KEF49_RS01975 (KEF49_01975)	-	422590..423954 (-)	1365	WP_065980702.1	aspartate kinase	-
KEF49_RS01980 (KEF49_01980)	ceuB	424369..425322 (+)	954	WP_013351008.1	ABC transporter permease	Machinery gene
KEF49_RS01985 (KEF49_01985)	-	425312..426259 (+)	948	WP_065980704.1	iron chelate uptake ABC transporter family permease subunit	-
KEF49_RS01990 (KEF49_01990)	-	426253..427011 (+)	759	WP_065980705.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45564.84 Da
• Isoelectric Point: 5.0703

>NTDB_id=559561 KEF49_RS01960 WP_065980700.1 420986..422134(+) (rapC) [Bacillus amyloliquefaciens strain Ba13]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQNRID
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=559561 KEF49_RS01960 WP_065980700.1 420986..422134(+) (rapC) [Bacillus amyloliquefaciens strain Ba13]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTACCGATACATAAGAACATTCAGCGT
GCCGGATGCAGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTACTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTATTTGGAGCCGCTGGAGAAATTGAAAATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTCGATAACATAGATAACAGCCAGGCCGGGCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAGGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAGCGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAGCAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGAACCGCATCGAT
GAAGCCATACCGTACTTTGAACGGGCAGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTCCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCATCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTCGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571