Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | HD73_RS22640 | Genome accession | NC_020238 |
| Coordinates | 4367423..4368466 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013180.1 | Uniprot ID | A0A9X5WLU9 |
| Organism | Bacillus thuringiensis serovar kurstaki str. HD73 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4362423..4373466
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HD73_RS22595 (HD73_4538) | - | 4362854..4363054 (-) | 201 | WP_000106083.1 | YqzE family protein | - |
| HD73_RS22600 (HD73_4539) | - | 4363093..4363590 (-) | 498 | WP_000836650.1 | shikimate kinase | - |
| HD73_RS22605 (HD73_4540) | - | 4363706..4364356 (-) | 651 | WP_000183862.1 | 2OG-Fe(II) oxygenase | - |
| HD73_RS22610 (HD73_4541) | comGG | 4364533..4364904 (-) | 372 | WP_001231273.1 | competence type IV pilus minor pilin ComGG | - |
| HD73_RS22615 (HD73_4542) | comGF | 4364901..4365371 (-) | 471 | WP_000923099.1 | competence type IV pilus minor pilin ComGF | - |
| HD73_RS22620 (HD73_4543) | - | 4365341..4365643 (-) | 303 | WP_000829473.1 | hypothetical protein | - |
| HD73_RS22625 (HD73_4544) | comGD | 4365636..4366091 (-) | 456 | WP_000813142.1 | competence type IV pilus minor pilin ComGD | - |
| HD73_RS22630 (HD73_4545) | comGC | 4366088..4366387 (-) | 300 | WP_001178686.1 | competence type IV pilus major pilin ComGC | - |
| HD73_RS22635 (HD73_4546) | comGB | 4366399..4367430 (-) | 1032 | WP_000475193.1 | competence type IV pilus assembly protein ComGB | - |
| HD73_RS22640 (HD73_4547) | comGA | 4367423..4368466 (-) | 1044 | WP_001013180.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HD73_RS22645 (HD73_4548) | - | 4368672..4369367 (+) | 696 | WP_000434125.1 | helix-turn-helix domain-containing protein | - |
| HD73_RS22650 (HD73_4549) | - | 4369493..4369735 (+) | 243 | WP_000440721.1 | DUF2626 domain-containing protein | - |
| HD73_RS22655 (HD73_4550) | - | 4369842..4371236 (+) | 1395 | WP_001094330.1 | L-cystine transporter | - |
| HD73_RS22660 (HD73_4551) | - | 4371316..4371708 (-) | 393 | WP_000875388.1 | hypothetical protein | - |
| HD73_RS22665 (HD73_4552) | - | 4371796..4372011 (-) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| HD73_RS22670 (HD73_4553) | - | 4372264..4372575 (+) | 312 | WP_001093237.1 | hypothetical protein | - |
| HD73_RS22675 (HD73_4554) | - | 4372610..4373098 (-) | 489 | WP_000764261.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39157.52 Da Isoelectric Point: 8.5482
>NTDB_id=55952 HD73_RS22640 WP_001013180.1 4367423..4368466(-) (comGA) [Bacillus thuringiensis serovar kurstaki str. HD73]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=55952 HD73_RS22640 WP_001013180.1 4367423..4368466(-) (comGA) [Bacillus thuringiensis serovar kurstaki str. HD73]
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |