Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   KEM15_RS02635 Genome accession   NZ_CP073632
Coordinates   502915..503964 (+) Length   349 a.a.
NCBI ID   WP_274504630.1    Uniprot ID   -
Organism   Streptococcus parasuis strain NN1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 497915..508964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEM15_RS02600 (KEM15_02565) - 498644..499738 (+) 1095 WP_274504626.1 sensor histidine kinase -
  KEM15_RS02605 (KEM15_02570) - 499735..500334 (+) 600 WP_130554732.1 response regulator transcription factor -
  KEM15_RS02610 (KEM15_02575) - 500452..500673 (+) 222 WP_274504627.1 YqgQ family protein -
  KEM15_RS02615 (KEM15_02580) - 500670..501056 (+) 387 WP_130554731.1 rhodanese-like domain-containing protein -
  KEM15_RS02620 (KEM15_02585) - 501089..501823 (+) 735 WP_274504628.1 hypothetical protein -
  KEM15_RS02625 (KEM15_02590) rsmD 501911..502450 (+) 540 WP_274504629.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  KEM15_RS02630 (KEM15_02595) coaD 502440..502928 (+) 489 WP_217374760.1 pantetheine-phosphate adenylyltransferase -
  KEM15_RS02635 (KEM15_02600) sepM 502915..503964 (+) 1050 WP_274504630.1 SepM family pheromone-processing serine protease Regulator
  KEM15_RS02640 (KEM15_02605) - 504248..504901 (+) 654 WP_274504631.1 YutD family protein -
  KEM15_RS02645 (KEM15_02610) rlmN 504910..506022 (+) 1113 WP_024391183.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  KEM15_RS02650 (KEM15_02615) - 506019..506531 (+) 513 WP_217374764.1 VanZ family protein -
  KEM15_RS02655 (KEM15_02620) nadE 506966..507790 (-) 825 WP_217374765.1 ammonia-dependent NAD(+) synthetase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37866.68 Da        Isoelectric Point: 4.1974

>NTDB_id=559504 KEM15_RS02635 WP_274504630.1 502915..503964(+) (sepM) [Streptococcus parasuis strain NN1]
MKKNKKWLLIVSIIMGTLLIWFSVFVRLPYYIESPGGASDIREVLTVNNEEDKEPGSYNFTYVSVLQATALQLLIAQFNP
YADIVSAEEMTGGADSEEYYRIAQFYMETSQNMAKYQGLTLAGKDVEMDFFGVYVLDLAEDSTFKNVLNIGDTVVSINGQ
TFESSQELIKYVSGLELDSDVTVGYVSDGEEKTAHGKIIKLSNGKNGIGITLVDHTEVRSSVPIDFQTGGIGGPSAGLMF
TLAIYTQLAEPDLRDGRVIAGTGTIEQDGSVGDIGGADKKVLSAINAGASVFFVPNNPVDPEILKKNPTAKTNYEEAKEA
AEKANADIEIVPVTTVQEAIDYLKSTKSE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=559504 KEM15_RS02635 WP_274504630.1 502915..503964(+) (sepM) [Streptococcus parasuis strain NN1]
ATGAAGAAAAATAAGAAATGGCTATTGATTGTTTCAATTATTATGGGGACGTTATTGATATGGTTTTCCGTTTTTGTACG
TCTACCATATTATATTGAGAGTCCTGGAGGGGCTTCGGATATTCGGGAAGTATTGACAGTCAACAATGAAGAAGATAAGG
AGCCAGGTTCTTATAATTTTACCTATGTATCGGTCTTGCAGGCAACAGCCTTACAGTTGCTGATTGCTCAGTTTAACCCC
TACGCAGATATTGTTTCTGCAGAAGAAATGACGGGTGGTGCAGACAGTGAAGAATACTATCGGATAGCTCAATTTTATAT
GGAAACCTCTCAAAACATGGCTAAATATCAAGGACTGACCCTGGCTGGCAAGGATGTGGAGATGGATTTCTTTGGGGTAT
ATGTGTTGGATTTGGCAGAAGACTCTACGTTTAAAAATGTATTGAATATCGGTGATACGGTTGTTAGTATAAATGGTCAA
ACGTTTGAATCTTCTCAGGAACTAATTAAATATGTTTCAGGCTTAGAACTTGATAGTGATGTAACAGTTGGCTATGTTAG
TGATGGAGAAGAAAAGACTGCCCACGGAAAAATTATCAAATTATCAAATGGTAAAAACGGAATTGGTATCACGCTAGTAG
ACCATACTGAGGTAAGAAGTTCTGTCCCGATTGATTTCCAAACAGGAGGAATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACATTAGCTATTTATACACAGCTGGCTGAGCCAGACTTGCGTGATGGTCGTGTTATTGCAGGAACAGGAACGATTGAACA
AGATGGTTCCGTTGGAGACATCGGAGGAGCAGATAAAAAAGTATTATCTGCGATTAATGCTGGTGCAAGTGTTTTCTTTG
TTCCAAATAATCCAGTGGACCCAGAAATTTTGAAGAAGAATCCAACAGCTAAGACAAACTATGAAGAGGCAAAAGAAGCA
GCAGAAAAGGCCAATGCTGATATTGAAATCGTACCAGTGACGACTGTTCAAGAAGCCATTGATTATTTGAAGAGTACTAA
GAGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

61.561

99.14

0.61