Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | KEM15_RS00940 | Genome accession | NZ_CP073632 |
| Coordinates | 170694..173147 (+) | Length | 817 a.a. |
| NCBI ID | WP_217374557.1 | Uniprot ID | - |
| Organism | Streptococcus parasuis strain NN1 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 165694..178147
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KEM15_RS00905 (KEM15_00880) | nusG | 165833..166372 (+) | 540 | WP_274504483.1 | transcription termination/antitermination protein NusG | - |
| KEM15_RS00910 (KEM15_00885) | - | 166610..166801 (-) | 192 | WP_217374555.1 | helix-turn-helix transcriptional regulator | - |
| KEM15_RS00920 (KEM15_00895) | rpsB | 167604..168380 (+) | 777 | WP_171989595.1 | 30S ribosomal protein S2 | - |
| KEM15_RS00925 (KEM15_00900) | tsf | 168536..169576 (+) | 1041 | WP_217374556.1 | translation elongation factor Ts | - |
| KEM15_RS00930 (KEM15_00905) | - | 169738..170076 (-) | 339 | WP_130554180.1 | thioredoxin domain-containing protein | - |
| KEM15_RS00935 (KEM15_00910) | - | 170230..170688 (+) | 459 | WP_217375130.1 | CtsR family transcriptional regulator | - |
| KEM15_RS00940 (KEM15_00915) | clpC | 170694..173147 (+) | 2454 | WP_217374557.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| KEM15_RS00945 (KEM15_00920) | - | 173276..174313 (+) | 1038 | WP_274504484.1 | AAA family ATPase | - |
| KEM15_RS00950 (KEM15_00925) | pnuC | 174353..175138 (+) | 786 | WP_274504902.1 | nicotinamide riboside transporter PnuC | - |
| KEM15_RS00955 (KEM15_00930) | - | 175131..175913 (+) | 783 | WP_274504485.1 | NUDIX domain-containing protein | - |
| KEM15_RS00960 (KEM15_00935) | dusB | 175948..176952 (-) | 1005 | WP_172036533.1 | tRNA dihydrouridine synthase DusB | - |
| KEM15_RS00965 (KEM15_00940) | hslO | 176945..177811 (-) | 867 | WP_274504486.1 | Hsp33 family molecular chaperone HslO | - |
Sequence
Protein
Download Length: 817 a.a. Molecular weight: 90682.16 Da Isoelectric Point: 5.7872
>NTDB_id=559497 KEM15_RS00940 WP_217374557.1 170694..173147(+) (clpC) [Streptococcus parasuis strain NN1]
MKISTGLQRVYEDAQLIAQRYACDHLETWHILLAFVINHDTVAGAVLAEYPMSISDFEHATFVVTEKVYREELDKFNILP
SSKRLDDTAQFARKIAEVVKAKELGSEHLFQAMLLDKRSTASQILDKVGFHFEEIEDEFRFVDLRKNLEYRAGFTKEDLK
AIRSVMKGGKAKTASVGQMMGMPPTAQSGGLEDYTRDLTALAREGKIEPVIGRDAEISRMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQRVAEGDVPVSLAKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHRVRIGDATV
ETAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQVEETGLSTIDKALMAGKYKTVSKLLIKTTEKNLLSQNDDLEV
TEDDILETLSRLSGIPVAKLSQSDTKKYLNLEKELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGAADLSKDHKEVEKRIFEELKKTYRPEFINRIDEKVVF
HSLTESDMLDVVKVMVKPLIVVAASKGILLKFQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPMAEMLLREDLGAGMV
LKVGVKGNQLKFESVNE
MKISTGLQRVYEDAQLIAQRYACDHLETWHILLAFVINHDTVAGAVLAEYPMSISDFEHATFVVTEKVYREELDKFNILP
SSKRLDDTAQFARKIAEVVKAKELGSEHLFQAMLLDKRSTASQILDKVGFHFEEIEDEFRFVDLRKNLEYRAGFTKEDLK
AIRSVMKGGKAKTASVGQMMGMPPTAQSGGLEDYTRDLTALAREGKIEPVIGRDAEISRMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQRVAEGDVPVSLAKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHRVRIGDATV
ETAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQVEETGLSTIDKALMAGKYKTVSKLLIKTTEKNLLSQNDDLEV
TEDDILETLSRLSGIPVAKLSQSDTKKYLNLEKELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGAADLSKDHKEVEKRIFEELKKTYRPEFINRIDEKVVF
HSLTESDMLDVVKVMVKPLIVVAASKGILLKFQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPMAEMLLREDLGAGMV
LKVGVKGNQLKFESVNE
Nucleotide
Download Length: 2454 bp
>NTDB_id=559497 KEM15_RS00940 WP_217374557.1 170694..173147(+) (clpC) [Streptococcus parasuis strain NN1]
ATGAAAATTTCAACAGGCTTACAACGGGTTTATGAAGATGCTCAGTTGATTGCCCAACGATATGCATGCGATCATTTAGA
AACGTGGCATATTTTGCTAGCATTTGTCATCAATCACGATACGGTAGCTGGTGCTGTTTTGGCAGAATACCCAATGAGTA
TTTCAGATTTCGAACATGCTACTTTTGTTGTTACAGAAAAAGTATACCGTGAAGAATTGGATAAATTTAATATTCTACCC
TCCTCAAAGAGATTAGACGATACAGCTCAGTTCGCTAGAAAGATTGCAGAAGTCGTTAAGGCAAAAGAATTAGGAAGCGA
GCATTTGTTTCAGGCAATGCTGTTAGACAAACGTTCAACCGCAAGTCAAATTCTAGATAAAGTAGGTTTTCATTTTGAAG
AGATAGAAGATGAATTCCGTTTTGTTGATTTACGTAAAAACTTAGAGTATCGTGCAGGGTTCACCAAAGAGGATTTGAAA
GCTATCCGTAGCGTGATGAAAGGTGGAAAGGCTAAAACAGCAAGTGTAGGTCAAATGATGGGCATGCCACCAACTGCTCA
AAGTGGTGGATTGGAGGATTATACACGAGATTTGACAGCCTTAGCTCGCGAGGGGAAAATTGAACCTGTTATTGGTCGCG
ATGCTGAAATTTCACGGATGATTCAAATTCTATCACGTAAAACGAAGAACAATCCTGTTTTGGTTGGCGATGCAGGTGTT
GGGAAAACAGCACTAGCATTAGGTCTTGCTCAGCGTGTTGCAGAAGGAGATGTTCCTGTCAGTTTAGCAAAGATGCGTGT
TTTGGAACTTGATTTGATGAATGTTATTGCAGGAACTCGTTTCCGTGGTGACTTTGAAGAGCGGATGAATAATATCATCA
ATGATATTGAAGAAGATGGTCAGGTTATCCTCTTTATCGATGAATTACATACTATTATGGGGTCGGGTTCGGGAATTGAT
TCAACCTTAGATGCTGCCAATATTCTCAAACCGGCCTTGGCTCGAGGGACCCTACGCACTGTTGGTGCAACGACACAGGA
TGAATACCAAAAGCATATTGAAAAAGATGCTGCCCTGGTCCGTCGTTTTGCCAAAGTGACCATTGAAGAGCCGACAGTTG
AGGACAGTATTGCCATTTTGACCGGGCTTAAAGGGACTTTTGAAAAATACCATAGGGTCCGTATTGGAGATGCGACTGTT
GAGACAGCTGTGACTTACGCCAAGAGGTATCTGACTAGTAAAAACTTGCCAGACTCAGCAATTGACTTGTTAGATGAAGC
CAGTGCAACGGTACAAAATAGAGTGAAAGGGCAGGTTGAAGAAACAGGTCTTTCAACTATTGATAAAGCTTTGATGGCTG
GAAAATACAAGACTGTCAGTAAGCTCTTAATCAAGACTACAGAAAAGAATCTGTTGAGTCAAAACGATGACTTAGAAGTG
ACAGAAGATGACATTTTGGAAACACTTAGTCGCTTATCAGGTATCCCAGTAGCCAAGCTCAGCCAATCAGATACTAAGAA
GTACCTGAATCTGGAAAAAGAATTGCACAAACGTGTGATTGGGCAGGAAGAAGCTATTTCTGCCGTTAGTAGAGCTATCC
GCCGTAATCAGTCGGGGATTCGGACAGGTCGCAGACCGATTGGTTCCTTTATGTTCTTAGGACCAACTGGTGTCGGTAAG
ACTGAGCTTGCTAAAGCCTTGGCAGAGGTTCTCTTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTATAT
GGAGAAATTTGCGGCCAGCCGTCTCAATGGAGCGCCTCCAGGCTATGTTGGCTATGAAGAAGGTGGCGAATTAACAGAAA
AAGTTCGTAATAAACCTTATTCTGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCATCCAGATATTTTCAATGTTCTCTTG
CAGGTCTTGGATGACGGTGTCTTGACCGATAGTAAAGGTCGCAAGGTTGATTTCTCCAATACAGTCATTATCATGACATC
AAACTTGGGGGCAACAGCTCTTCGCGATGACAAGACCGTTGGGTTTGGTGCGGCTGATCTGTCCAAAGACCACAAGGAAG
TGGAGAAACGCATTTTTGAAGAATTGAAAAAGACCTATCGTCCTGAATTTATCAACCGTATCGATGAAAAGGTAGTCTTC
CACAGCTTGACAGAATCCGATATGTTGGATGTTGTCAAAGTGATGGTGAAGCCATTGATTGTGGTTGCCGCGAGCAAGGG
AATCCTCCTGAAATTCCAACCATCAGCCCTCAAATTGTTGGCCAAAGAAGGCTACGATCCAGAAATGGGTGCTCGCCCTC
TTCGTCGGTTGCTCCAAACAAAATTGGAAGACCCGATGGCAGAAATGCTTTTGCGTGAAGATCTTGGAGCAGGTATGGTT
CTGAAAGTGGGTGTCAAAGGTAACCAACTCAAATTTGAGAGTGTGAATGAATAG
ATGAAAATTTCAACAGGCTTACAACGGGTTTATGAAGATGCTCAGTTGATTGCCCAACGATATGCATGCGATCATTTAGA
AACGTGGCATATTTTGCTAGCATTTGTCATCAATCACGATACGGTAGCTGGTGCTGTTTTGGCAGAATACCCAATGAGTA
TTTCAGATTTCGAACATGCTACTTTTGTTGTTACAGAAAAAGTATACCGTGAAGAATTGGATAAATTTAATATTCTACCC
TCCTCAAAGAGATTAGACGATACAGCTCAGTTCGCTAGAAAGATTGCAGAAGTCGTTAAGGCAAAAGAATTAGGAAGCGA
GCATTTGTTTCAGGCAATGCTGTTAGACAAACGTTCAACCGCAAGTCAAATTCTAGATAAAGTAGGTTTTCATTTTGAAG
AGATAGAAGATGAATTCCGTTTTGTTGATTTACGTAAAAACTTAGAGTATCGTGCAGGGTTCACCAAAGAGGATTTGAAA
GCTATCCGTAGCGTGATGAAAGGTGGAAAGGCTAAAACAGCAAGTGTAGGTCAAATGATGGGCATGCCACCAACTGCTCA
AAGTGGTGGATTGGAGGATTATACACGAGATTTGACAGCCTTAGCTCGCGAGGGGAAAATTGAACCTGTTATTGGTCGCG
ATGCTGAAATTTCACGGATGATTCAAATTCTATCACGTAAAACGAAGAACAATCCTGTTTTGGTTGGCGATGCAGGTGTT
GGGAAAACAGCACTAGCATTAGGTCTTGCTCAGCGTGTTGCAGAAGGAGATGTTCCTGTCAGTTTAGCAAAGATGCGTGT
TTTGGAACTTGATTTGATGAATGTTATTGCAGGAACTCGTTTCCGTGGTGACTTTGAAGAGCGGATGAATAATATCATCA
ATGATATTGAAGAAGATGGTCAGGTTATCCTCTTTATCGATGAATTACATACTATTATGGGGTCGGGTTCGGGAATTGAT
TCAACCTTAGATGCTGCCAATATTCTCAAACCGGCCTTGGCTCGAGGGACCCTACGCACTGTTGGTGCAACGACACAGGA
TGAATACCAAAAGCATATTGAAAAAGATGCTGCCCTGGTCCGTCGTTTTGCCAAAGTGACCATTGAAGAGCCGACAGTTG
AGGACAGTATTGCCATTTTGACCGGGCTTAAAGGGACTTTTGAAAAATACCATAGGGTCCGTATTGGAGATGCGACTGTT
GAGACAGCTGTGACTTACGCCAAGAGGTATCTGACTAGTAAAAACTTGCCAGACTCAGCAATTGACTTGTTAGATGAAGC
CAGTGCAACGGTACAAAATAGAGTGAAAGGGCAGGTTGAAGAAACAGGTCTTTCAACTATTGATAAAGCTTTGATGGCTG
GAAAATACAAGACTGTCAGTAAGCTCTTAATCAAGACTACAGAAAAGAATCTGTTGAGTCAAAACGATGACTTAGAAGTG
ACAGAAGATGACATTTTGGAAACACTTAGTCGCTTATCAGGTATCCCAGTAGCCAAGCTCAGCCAATCAGATACTAAGAA
GTACCTGAATCTGGAAAAAGAATTGCACAAACGTGTGATTGGGCAGGAAGAAGCTATTTCTGCCGTTAGTAGAGCTATCC
GCCGTAATCAGTCGGGGATTCGGACAGGTCGCAGACCGATTGGTTCCTTTATGTTCTTAGGACCAACTGGTGTCGGTAAG
ACTGAGCTTGCTAAAGCCTTGGCAGAGGTTCTCTTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTATAT
GGAGAAATTTGCGGCCAGCCGTCTCAATGGAGCGCCTCCAGGCTATGTTGGCTATGAAGAAGGTGGCGAATTAACAGAAA
AAGTTCGTAATAAACCTTATTCTGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCATCCAGATATTTTCAATGTTCTCTTG
CAGGTCTTGGATGACGGTGTCTTGACCGATAGTAAAGGTCGCAAGGTTGATTTCTCCAATACAGTCATTATCATGACATC
AAACTTGGGGGCAACAGCTCTTCGCGATGACAAGACCGTTGGGTTTGGTGCGGCTGATCTGTCCAAAGACCACAAGGAAG
TGGAGAAACGCATTTTTGAAGAATTGAAAAAGACCTATCGTCCTGAATTTATCAACCGTATCGATGAAAAGGTAGTCTTC
CACAGCTTGACAGAATCCGATATGTTGGATGTTGTCAAAGTGATGGTGAAGCCATTGATTGTGGTTGCCGCGAGCAAGGG
AATCCTCCTGAAATTCCAACCATCAGCCCTCAAATTGTTGGCCAAAGAAGGCTACGATCCAGAAATGGGTGCTCGCCCTC
TTCGTCGGTTGCTCCAAACAAAATTGGAAGACCCGATGGCAGAAATGCTTTTGCGTGAAGATCTTGGAGCAGGTATGGTT
CTGAAAGTGGGTGTCAAAGGTAACCAACTCAAATTTGAGAGTGTGAATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
70.885 |
99.633 |
0.706 |
| clpC | Streptococcus pneumoniae D39 |
70.885 |
99.633 |
0.706 |
| clpC | Streptococcus pneumoniae TIGR4 |
70.762 |
99.633 |
0.705 |
| clpC | Streptococcus mutans UA159 |
65.602 |
99.633 |
0.654 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.951 |
99.878 |
0.649 |
| clpC | Streptococcus thermophilus LMD-9 |
64.951 |
99.878 |
0.649 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.499 |
100 |
0.494 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.22 |
100 |
0.437 |