Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SCSC_RS02525 Genome accession   NZ_AP014647
Coordinates   502074..502760 (+) Length   228 a.a.
NCBI ID   WP_003069999.1    Uniprot ID   F9P4U8
Organism   Streptococcus constellatus subsp. constellatus strain CCUG 24889     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 497074..507760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCSC_RS02510 (SCSC_0513) - 497606..498277 (-) 672 WP_006269831.1 methyltransferase -
  SCSC_RS02515 (SCSC_0514) metG 498714..500711 (+) 1998 WP_006269841.1 methionine--tRNA ligase -
  SCSC_RS02520 (SCSC_0515) - 500801..501982 (-) 1182 WP_006269837.1 DUF2974 domain-containing protein -
  SCSC_RS02525 (SCSC_0516) braR 502074..502760 (+) 687 WP_003069999.1 response regulator transcription factor Regulator
  SCSC_RS02530 (SCSC_0517) - 502744..503724 (+) 981 WP_006269847.1 sensor histidine kinase -
  SCSC_RS02535 (SCSC_0518) - 503848..504606 (+) 759 WP_003069997.1 TraX family protein -
  SCSC_RS09405 - 504713..504841 (+) 129 WP_006269833.1 hypothetical protein -
  SCSC_RS02540 (SCSC_0519) - 504861..505640 (+) 780 WP_003069995.1 ABC transporter ATP-binding protein -
  SCSC_RS02545 (SCSC_0520) - 505621..507603 (+) 1983 WP_006269822.1 FtsX-like permease family protein -

Sequence


Protein


Download         Length: 228 a.a.        Molecular weight: 26304.60 Da        Isoelectric Point: 4.9992

>NTDB_id=55940 SCSC_RS02525 WP_003069999.1 502074..502760(+) (braR) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MHKILLVEDDAVIRQQVKKMLEQWGFEVIAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMMYDGEVIALTKNEFQIL
RVLFEHSGSIVSRDDLMKELWNSDFFIDDNTLSVNIARLRKKLEDAGLKSFIETKKGIGYGLTNEFSK

Nucleotide


Download         Length: 687 bp        

>NTDB_id=55940 SCSC_RS02525 WP_003069999.1 502074..502760(+) (braR) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGCACAAGATATTATTAGTGGAAGACGATGCCGTCATTCGTCAACAAGTCAAAAAAATGCTGGAACAATGGGGATTTGA
GGTGATTGCTGTAGAGGATTTTATGCAGGTGCTGACGATTTTTGTCAAGGAAGAACCGCATCTAGTCCTGATGGATATTG
GTCTACCGTTGTTTAATGGTTATCATTGGTGCCAAGAAATTCGCAAGATTTCTAAAGTGCCTATTATGTTTTTATCTTCA
CGTGATCAGGCGATGGATATTGTCATGGCGATTAACATGGGCGGAGATGATTTTGTGACGAAGCCATTTGACAATAATGT
CTTGTTGGCTAAGGTTCAAGGACTCTTGCGTCGTTCGTATGAATTTGGGACAGATCAAAGTTTGTTGGAATACCATGGGG
TTATTCTCAATCTCAAGTCCATGGATATGATGTATGATGGAGAAGTGATTGCGTTAACGAAAAATGAATTTCAAATTCTG
CGTGTGCTATTTGAGCATTCTGGCAGTATTGTTTCGCGTGATGATCTCATGAAAGAACTGTGGAACAGTGATTTCTTTAT
TGATGACAATACCTTATCAGTCAATATCGCCCGTCTGCGCAAGAAATTAGAAGATGCTGGACTGAAAAGTTTTATTGAAA
CCAAGAAAGGAATTGGGTACGGATTGACGAATGAATTCTCAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9P4U8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

50

95.614

0.478


Multiple sequence alignment