Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SCSC_RS02055 Genome accession   NZ_AP014647
Coordinates   402306..403082 (-) Length   258 a.a.
NCBI ID   WP_006269735.1    Uniprot ID   -
Organism   Streptococcus constellatus subsp. constellatus strain CCUG 24889     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 397306..408082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCSC_RS02030 (SCSC_0417) - 397643..399043 (+) 1401 WP_006270079.1 Cof-type HAD-IIB family hydrolase -
  SCSC_RS02035 (SCSC_0418) - 399045..399437 (+) 393 WP_022524708.1 S1 RNA-binding domain-containing protein -
  SCSC_RS02040 (SCSC_0419) - 399538..401064 (-) 1527 WP_115342907.1 IS1182 family transposase -
  SCSC_RS02045 (SCSC_0421) - 401249..401566 (-) 318 WP_006269734.1 DUF960 domain-containing protein -
  SCSC_RS02050 (SCSC_0422) - 401686..402219 (-) 534 WP_003073655.1 DUF402 domain-containing protein -
  SCSC_RS02055 (SCSC_0423) recX 402306..403082 (-) 777 WP_006269735.1 recombination regulator RecX Regulator
  SCSC_RS02060 (SCSC_0424) - 403146..403922 (-) 777 WP_006269731.1 aminoglycoside 3'-phosphotransferase -
  SCSC_RS02065 (SCSC_0425) rlmD 403979..405343 (+) 1365 WP_006269730.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  SCSC_RS02070 (SCSC_0426) - 406189..407121 (-) 933 WP_003070210.1 nitronate monooxygenase -
  SCSC_RS02075 (SCSC_0427) - 407456..407689 (+) 234 WP_003070208.1 DUF1858 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30443.10 Da        Isoelectric Point: 8.8262

>NTDB_id=55932 SCSC_RS02055 WP_006269735.1 402306..403082(-) (recX) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MKITKIEKKKRLYLLELDEIDKLYITEDTIVHFMLSKGMNISEQELKEIQDYAQFSYGKNLALYYLSFKQRTVKEVRDYL
TKYEISLDTIEKVLTILIKDNWIDDRQYAYSFIHSNLLSGDKGAFVLKQKLAQKGITAPIIDEELCKFDFTEVSQKVAAK
LLRNYQSKLPSKALQDKILQSMLSKGFSYTEAKAAYQTLDIKEDEEIQQKLLYKELDKQYRKYSKKYDEYELKQHLTQAL
ARKGYDFSDIASALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=55932 SCSC_RS02055 WP_006269735.1 402306..403082(-) (recX) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGAAAATCACTAAAATTGAAAAGAAAAAGCGTCTCTATCTTTTAGAATTGGACGAAATTGACAAACTTTACATCACTGA
AGATACTATCGTTCACTTTATGTTATCAAAAGGCATGAATATCAGTGAGCAAGAATTAAAAGAAATTCAGGACTACGCAC
AGTTTTCTTACGGAAAAAATCTAGCTCTATATTATCTTTCTTTCAAGCAAAGAACTGTCAAAGAAGTGCGGGATTATTTG
ACAAAATACGAGATTTCCTTAGATACCATCGAGAAAGTGCTAACGATTCTCATAAAAGATAACTGGATAGATGACAGACA
ATATGCTTATTCCTTTATTCATTCCAATCTTCTATCTGGTGATAAAGGTGCTTTTGTCCTCAAGCAAAAATTGGCTCAAA
AAGGTATCACAGCTCCTATTATTGATGAAGAATTATGCAAATTTGATTTTACAGAAGTAAGTCAAAAAGTTGCTGCAAAA
CTACTCCGCAACTATCAAAGCAAACTACCAAGTAAGGCCCTGCAGGATAAAATTCTTCAATCTATGTTGAGCAAAGGCTT
TTCCTATACCGAAGCTAAGGCAGCTTATCAAACCTTAGACATCAAAGAAGATGAGGAAATTCAGCAGAAATTACTGTACA
AAGAATTAGACAAGCAATACCGCAAATATTCTAAAAAATATGACGAATATGAGTTAAAACAACACCTCACCCAAGCACTC
GCTCGCAAAGGTTATGATTTTTCTGATATTGCTAGCGCTCTCAGAGAATATCTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(81-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.094

100

0.36

Multiple sequence alignment