Detailed information NTG0055913

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: SCSC_RS00270
• Genome accession: NZ_AP014647
• Coordinates: 41658..43586 (-)
• Length: 642 a.a.
• NCBI ID: WP_006270085.1
• Uniprot ID: -
• Organism: Streptococcus constellatus subsp. constellatus strain CCUG 24889
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 36658..48586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCSC_RS00250 (SCSC_0052)	purM	37632..38651 (+)	1020	WP_006270098.1	phosphoribosylformylglycinamidine cyclo-ligase	-
SCSC_RS00255 (SCSC_0053)	purN	38648..39202 (+)	555	WP_037565897.1	phosphoribosylglycinamide formyltransferase	-
SCSC_RS00260 (SCSC_0054)	-	39309..40016 (+)	708	WP_006270100.1	suppressor of fused domain protein	-
SCSC_RS00265 (SCSC_0055)	purH	40058..41605 (+)	1548	WP_037565900.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
SCSC_RS00270 (SCSC_0056)	lytF	41658..43586 (-)	1929	WP_006270085.1	GBS Bsp-like repeat-containing protein	Regulator
SCSC_RS00275 (SCSC_0057)	purD	43782..45047 (+)	1266	WP_006270102.1	phosphoribosylamine--glycine ligase	-
SCSC_RS00280 (SCSC_0058)	purE	45255..45746 (+)	492	WP_006270093.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
SCSC_RS00285 (SCSC_0059)	purK	45733..46824 (+)	1092	WP_006270092.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
SCSC_RS00290 (SCSC_0060)	-	46834..47061 (+)	228	WP_006270103.1	hypothetical protein	-
SCSC_RS00295 (SCSC_0061)	-	47145..47504 (+)	360	WP_174842345.1	hypothetical protein	-
SCSC_RS00300 (SCSC_0062)	-	47587..48522 (+)	936	WP_006269888.1	IS30 family transposase	-

Sequence

Protein

• Length: 642 a.a.
• Molecular weight: 71566.20 Da
• Isoelectric Point: 8.5233

>NTDB_id=55913 SCSC_RS00270 WP_006270085.1 41658..43586(-) (lytF) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MKKYSQLFLLSSALLSVFSAQLTVQASEANNASKSSNPTTLASDVTVNVSGNSVSINYIRSQAQNPYTISHAVWSDENGQ
DDLKWYSASQTSTTVDLSQHSGYGTFHVHTYININGKMVGLNGTTFTLNKPTSQTKITTAGQIGQIHFTRNKDQKNSKIV
HAIWSEENGSDDLNWYDAEQEITKFDFSKHKGYGRYFVDTYENKNGKMIYQSGTTFNLEKPNPTIQTSFPEPGIMDIQIK
NVPETIYKLTVPTWSDKNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGTTVQVRSDQ
LPSEEEQKPLFSVENINQEQGTYTVKTKETSKSKSIQSVRVPIWSTTNQSNIKWYTATDNGDGTFSTTFNIRNHQALSGT
YINHIYVKYKDGSEHSYATDSVSMFAEQIKTKVAVTKRSIYNYEVTVTDAYGDGNIILPTWSEVNGQDDIQWYTATKTGN
GIYKFTIDTQKHTGSGLFHTHVYRNLNGKMIGLTGTSYQVEKPVISFQPNYAAATTYPKGQCTWGAKALAPWAGNYWGNG
GDWATSARRAGFKTGTTPQVGAIICWTDGSYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGVVSYIY
PK

Nucleotide

• Length: 1929 bp

>NTDB_id=55913 SCSC_RS00270 WP_006270085.1 41658..43586(-) (lytF) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGAAAAAATATAGTCAATTGTTTTTACTATCCAGCGCCCTTTTGAGTGTTTTTTCAGCTCAACTAACAGTTCAAGCCTC
GGAAGCAAATAATGCTTCAAAAAGCTCAAATCCAACAACCCTTGCTAGCGATGTTACTGTCAATGTTTCTGGCAATAGCG
TTTCTATCAACTACATACGTTCACAAGCCCAAAACCCCTACACCATTTCCCATGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACCTTAAATGGTATTCCGCATCTCAAACATCAACAACTGTTGATTTGAGCCAACATTCTGGGTACGGTACTTTCCA
TGTCCATACATATATCAACATCAATGGAAAAATGGTCGGTTTAAATGGAACGACTTTCACTCTGAATAAACCTACTAGTC
AAACAAAAATTACGACAGCTGGACAGATTGGGCAAATTCATTTTACACGCAATAAAGATCAAAAAAATTCTAAAATTGTT
CATGCCATTTGGTCTGAAGAAAATGGTAGTGATGATCTCAACTGGTACGATGCTGAACAGGAAATAACTAAATTTGACTT
TTCCAAACACAAGGGTTATGGGAGATATTTTGTAGATACTTATGAAAATAAAAATGGTAAAATGATTTACCAGTCAGGTA
CCACTTTTAACCTTGAAAAACCAAATCCTACTATCCAAACTAGTTTTCCAGAACCTGGTATTATGGATATTCAGATCAAA
AATGTCCCTGAAACAATCTATAAACTAACTGTTCCAACTTGGTCTGATAAAAACGGACAGGATGATCTTCAATGGTATGC
AGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTTATCACA
TTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAACTACGGTACAAGTTCGTTCCGATCAA
TTACCTTCGGAAGAAGAGCAAAAGCCATTATTCTCTGTTGAAAATATCAATCAAGAACAAGGAACATATACGGTCAAAAC
TAAGGAAACTTCAAAATCCAAATCCATTCAATCCGTTCGCGTTCCTATTTGGAGTACTACAAATCAGAGTAATATCAAAT
GGTACACAGCCACTGACAATGGAGACGGAACTTTTTCAACAACCTTTAATATCCGCAATCATCAGGCTTTGTCTGGAACC
TATATCAATCATATTTATGTAAAATATAAAGACGGTAGTGAGCATAGTTATGCAACAGATTCGGTTAGCATGTTCGCAGA
ACAGATAAAAACGAAAGTAGCTGTCACGAAACGCTCGATCTACAATTATGAAGTAACAGTGACAGATGCTTATGGAGATG
GAAATATCATCCTGCCTACCTGGTCTGAAGTCAACGGGCAAGATGATATCCAGTGGTACACAGCTACTAAAACTGGAAAT
GGTATCTACAAGTTCACTATTGATACACAAAAACACACTGGTAGCGGGCTTTTCCACACACATGTCTACCGCAATCTCAA
CGGTAAAATGATTGGACTAACAGGTACGAGCTATCAAGTAGAGAAACCTGTTATATCCTTTCAACCCAATTATGCTGCTG
CAACTACTTATCCAAAAGGTCAATGCACTTGGGGTGCTAAAGCTCTAGCACCTTGGGCTGGAAATTATTGGGGAAATGGT
GGCGATTGGGCTACTAGTGCCAGACGTGCTGGTTTTAAAACAGGAACAACTCCACAAGTCGGAGCCATTATTTGTTGGAC
AGATGGTAGTTACGGGCACGTTGGAGTCGTCACTCACGTGGCCTCAAACACCCGTATTCAGATTCAAGAGGCAAACTACG
CTGGGAAACAGTACATTGGCAACTTTCGTGGCTGGTTTAATCCCCATGCAGCTGGGCAAGGAGTAGTCAGTTACATTTAT
CCAAAATAA

Domains

Predicted by InterProScan.

• CHAP domain (CHAP) (535-612)

• GBS Bsp-like repeat (GBS_Bsp-like) (230-300)

• GBS Bsp-like repeat (GBS_Bsp-like) (440-516)

• GBS Bsp-like repeat (GBS_Bsp-like) (67-125)

• GBS Bsp-like repeat (GBS_Bsp-like) (333-419)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii strain NCTC7865	44.045	82.399	0.363