Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   J8N01_RS25090 Genome accession   NZ_CP073301
Coordinates   4410526..4410720 (-) Length   64 a.a.
NCBI ID   WP_029324748.1    Uniprot ID   A0A2B0NED9
Organism   Priestia megaterium strain HT517     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4405526..4415720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J8N01_RS25065 (J8N01_24630) - 4405693..4406715 (-) 1023 WP_013055407.1 ABC transporter ATP-binding protein -
  J8N01_RS25070 (J8N01_24635) - 4406942..4407715 (-) 774 WP_013055406.1 DUF2268 domain-containing protein -
  J8N01_RS25075 (J8N01_24640) fabF 4407821..4409062 (-) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  J8N01_RS25080 (J8N01_24645) - 4409102..4410040 (-) 939 WP_013055404.1 beta-ketoacyl-ACP synthase III -
  J8N01_RS25085 (J8N01_24650) - 4410297..4410497 (+) 201 WP_029324750.1 hypothetical protein -
  J8N01_RS25090 (J8N01_24655) comZ 4410526..4410720 (-) 195 WP_029324748.1 ComZ family protein Regulator
  J8N01_RS25095 (J8N01_24660) - 4410799..4411683 (-) 885 WP_013055402.1 NAD-dependent epimerase/dehydratase family protein -
  J8N01_RS25100 (J8N01_24665) - 4411865..4412605 (-) 741 WP_013055401.1 hypothetical protein -
  J8N01_RS25105 (J8N01_24670) - 4412815..4413003 (+) 189 WP_013055400.1 YjzD family protein -
  J8N01_RS25110 (J8N01_24675) - 4413207..4414091 (+) 885 WP_013055399.1 NAD(P)-dependent oxidoreductase -
  J8N01_RS25115 (J8N01_24680) galT 4414134..4415657 (-) 1524 WP_013055398.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7330.37 Da        Isoelectric Point: 3.9484

>NTDB_id=558930 J8N01_RS25090 WP_029324748.1 4410526..4410720(-) (comZ) [Priestia megaterium strain HT517]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMSDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=558930 J8N01_RS25090 WP_029324748.1 4410526..4410720(-) (comZ) [Priestia megaterium strain HT517]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTGCAGCCGGTATTGACATTACTAACAAAAGTAATGAGCGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0NED9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563