Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | L2Z36_RS01460 | Genome accession | NZ_CP091340 |
| Coordinates | 311224..311697 (+) | Length | 157 a.a. |
| NCBI ID | WP_000993729.1 | Uniprot ID | A0A0D5YCX7 |
| Organism | Acinetobacter baumannii strain AB227-VUB | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 306224..316697
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Z36_RS01440 (L2Z36_01440) | - | 307612..308499 (+) | 888 | WP_001017320.1 | metal-dependent hydrolase | - |
| L2Z36_RS01445 (L2Z36_01445) | - | 308630..309220 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| L2Z36_RS01450 (L2Z36_01450) | - | 309242..310324 (+) | 1083 | WP_001246387.1 | TPM domain-containing protein | - |
| L2Z36_RS01455 (L2Z36_01455) | - | 310318..310878 (+) | 561 | WP_000258946.1 | TPM domain-containing protein | - |
| L2Z36_RS01460 (L2Z36_01460) | pilA | 311224..311697 (+) | 474 | WP_000993729.1 | pilin | Machinery gene |
| L2Z36_RS01465 (L2Z36_01465) | - | 311942..313570 (+) | 1629 | WP_001195775.1 | O-antigen ligase family protein | - |
| L2Z36_RS01470 (L2Z36_01470) | bfr | 313613..314077 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| L2Z36_RS01475 (L2Z36_01475) | - | 314322..314516 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| L2Z36_RS01480 (L2Z36_01480) | - | 314726..315109 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 15793.78 Da Isoelectric Point: 4.4982
>NTDB_id=558915 L2Z36_RS01460 WP_000993729.1 311224..311697(+) (pilA) [Acinetobacter baumannii strain AB227-VUB]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQTYIAKSQVSRAVSESGSLKTVIEDCLNNGKTTVGEAAGECAIGATGSNI
LDGAAQSGETLAAGTGVPQVTLANTGAATIVATFGNSASTALKSTPTTVTWTRTTDGTWTCESTAAEKYNSSACPAA
Nucleotide
Download Length: 474 bp
>NTDB_id=558915 L2Z36_RS01460 WP_000993729.1 311224..311697(+) (pilA) [Acinetobacter baumannii strain AB227-VUB]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCTGCAATTGCGAT
TCCGCAATATCAAACTTATATTGCCAAATCGCAAGTATCACGTGCGGTTAGTGAATCAGGTTCCTTAAAAACTGTAATTG
AAGACTGTTTAAATAATGGTAAAACTACAGTTGGTGAAGCTGCTGGTGAATGTGCTATTGGGGCAACGGGTTCAAATATT
TTAGATGGGGCTGCACAAAGTGGTGAAACTTTAGCTGCTGGAACTGGGGTTCCACAAGTTACATTAGCAAATACAGGCGC
TGCGACAATTGTTGCAACTTTTGGTAATTCTGCTTCTACTGCATTAAAATCTACACCAACTACAGTAACTTGGACTCGTA
CAACAGATGGCACTTGGACATGTGAAAGTACTGCTGCCGAAAAATATAATAGTTCTGCTTGCCCTGCAGCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCTGCAATTGCGAT
TCCGCAATATCAAACTTATATTGCCAAATCGCAAGTATCACGTGCGGTTAGTGAATCAGGTTCCTTAAAAACTGTAATTG
AAGACTGTTTAAATAATGGTAAAACTACAGTTGGTGAAGCTGCTGGTGAATGTGCTATTGGGGCAACGGGTTCAAATATT
TTAGATGGGGCTGCACAAAGTGGTGAAACTTTAGCTGCTGGAACTGGGGTTCCACAAGTTACATTAGCAAATACAGGCGC
TGCGACAATTGTTGCAACTTTTGGTAATTCTGCTTCTACTGCATTAAAATCTACACCAACTACAGTAACTTGGACTCGTA
CAACAGATGGCACTTGGACATGTGAAAGTACTGCTGCCGAAAAATATAATAGTTCTGCTTGCCCTGCAGCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
44.099 |
100 |
0.452 |
| pilA | Pseudomonas aeruginosa PAK |
42.581 |
98.726 |
0.42 |
| comP | Acinetobacter baylyi ADP1 |
39.873 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.176 |
97.452 |
0.401 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
37.58 |
100 |
0.376 |
| pilA | Vibrio cholerae strain A1552 |
37.58 |
100 |
0.376 |
| pilA | Vibrio cholerae C6706 |
37.58 |
100 |
0.376 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.562 |
97.452 |
0.376 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
37.179 |
99.363 |
0.369 |