Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   KCL43_RS03115 Genome accession   NZ_CP073275
Coordinates   635583..636620 (+) Length   345 a.a.
NCBI ID   WP_021320489.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain IN-6992     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 630583..641620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCL43_RS03090 (KCL43_03090) - 630895..632226 (+) 1332 WP_206157655.1 dipeptidase -
  KCL43_RS03095 (KCL43_03095) arcC 632244..633194 (+) 951 WP_043029469.1 carbamate kinase -
  KCL43_RS03100 (KCL43_03100) asnA 633414..634406 (+) 993 WP_012515219.1 aspartate--ammonia ligase -
  KCL43_RS03105 (KCL43_03105) rsmD 634576..635115 (+) 540 WP_206157656.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  KCL43_RS03110 (KCL43_03110) coaD 635105..635605 (+) 501 WP_012515221.1 pantetheine-phosphate adenylyltransferase -
  KCL43_RS03115 (KCL43_03115) sepM 635583..636620 (+) 1038 WP_021320489.1 SepM family pheromone-processing serine protease Regulator
  KCL43_RS03120 (KCL43_03120) - 637226..637840 (+) 615 WP_012678319.1 YutD family protein -
  KCL43_RS03125 (KCL43_03125) rlmN 637844..638926 (+) 1083 WP_012515224.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  KCL43_RS03130 (KCL43_03130) - 639349..639798 (-) 450 WP_228269161.1 peptidase -
  KCL43_RS03135 (KCL43_03135) - 640198..640728 (+) 531 WP_012515230.1 Dps family protein -
  KCL43_RS03140 (KCL43_03140) - 641101..641334 (+) 234 WP_012515231.1 YqgQ family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37416.03 Da        Isoelectric Point: 9.2833

>NTDB_id=558769 KCL43_RS03115 WP_021320489.1 635583..636620(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
MKTIKKFKWWLIGLVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVDKDVKKANPKAISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=558769 KCL43_RS03115 WP_021320489.1 635583..636620(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATTGGCTTAGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCGGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAACGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGGATAAGGACGTCAAAAAAGCAAATCCTAAGGCCATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACTGTTCAAGATGCTATAAGCTACCTTAAAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

70.145

100

0.701