Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   KCL43_RS02195 Genome accession   NZ_CP073275
Coordinates   446864..447589 (+) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain IN-6992     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 441864..452589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCL43_RS02165 (KCL43_02165) tsaE 442282..442725 (+) 444 WP_043040146.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  KCL43_RS02170 (KCL43_02170) - 442718..443245 (+) 528 WP_111710372.1 GNAT family N-acetyltransferase -
  KCL43_RS02175 (KCL43_02175) brpA 443246..444508 (+) 1263 WP_115267099.1 biofilm formation/cell division transcriptional regulator BrpA -
  KCL43_RS02180 (KCL43_02180) - 444672..444974 (-) 303 WP_115267098.1 chemotaxis protein -
  KCL43_RS02185 (KCL43_02185) - 444971..445390 (-) 420 WP_111677795.1 HIT family protein -
  KCL43_RS02190 (KCL43_02190) - 445842..446327 (-) 486 WP_165623486.1 hypothetical protein -
  KCL43_RS02195 (KCL43_02195) pptA 446864..447589 (+) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  KCL43_RS02200 (KCL43_02200) - 447593..448627 (+) 1035 WP_165623485.1 ABC transporter permease -
  KCL43_RS02205 (KCL43_02205) ccrZ 448690..449481 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  KCL43_RS02210 (KCL43_02210) trmB 449481..450116 (+) 636 WP_115250646.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KCL43_RS02215 (KCL43_02215) - 450173..451570 (-) 1398 WP_206157612.1 ISNCY family transposase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=558765 KCL43_RS02195 WP_012678429.1 446864..447589(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=558765 KCL43_RS02195 WP_012678429.1 446864..447589(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCTT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTATGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGCTTGACGGATAAGTTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGCTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACTTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73