Detailed information NTG0558759

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: KCL43_RS00840
• Genome accession: NZ_CP073275
• Coordinates: 151450..153891 (+)
• Length: 813 a.a.
• NCBI ID: WP_212573364.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain IN-6992
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 146450..158891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCL43_RS00815 (KCL43_00815)	ahpF	147868..149400 (-)	1533	WP_111689774.1	alkyl hydroperoxide reductase subunit F	-
KCL43_RS00820 (KCL43_00820)	ahpC	149421..149981 (-)	561	WP_012514798.1	alkyl hydroperoxide reductase subunit C	-
KCL43_RS00830 (KCL43_00830)	-	150614..150817 (+)	204	WP_012514799.1	cold-shock protein	-
KCL43_RS00835 (KCL43_00835)	-	150989..151450 (+)	462	WP_012514800.1	CtsR family transcriptional regulator	-
KCL43_RS00840 (KCL43_00840)	clpC	151450..153891 (+)	2442	WP_212573364.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
KCL43_RS10495	-	154239..154384 (-)	146	Protein_132	putative holin-like toxin	-
KCL43_RS00850 (KCL43_00850)	-	154665..155099 (+)	435	WP_111677663.1	hypothetical protein	-
KCL43_RS00855 (KCL43_00855)	-	155221..155661 (+)	441	WP_111677664.1	hypothetical protein	-
KCL43_RS00860 (KCL43_00860)	-	155880..156293 (+)	414	WP_042669846.1	hypothetical protein	-
KCL43_RS00865 (KCL43_00865)	-	156296..157609 (+)	1314	WP_212573365.1	hypothetical protein	-
KCL43_RS00870 (KCL43_00870)	-	157591..157983 (+)	393	WP_043052249.1	hypothetical protein	-
KCL43_RS00875 (KCL43_00875)	-	157964..158254 (+)	291	WP_111677666.1	hypothetical protein	-
KCL43_RS00880 (KCL43_00880)	groES	158553..158840 (+)	288	WP_012514806.1	co-chaperone GroES	-

Sequence

Protein

• Length: 813 a.a.
• Molecular weight: 90382.20 Da
• Isoelectric Point: 6.4367

>NTDB_id=558759 KCL43_RS00840 WP_212573364.1 151450..153891(+) (clpC) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
MMTYSLKMQDIFNQAQFQAERFDSPYLETWHILLAMVAVDHSLAAMVLSEFERKIKAEEYEAAAILAMGKSPKEVTSVQF
KPQSKALSEILAFAHAICKVTNEHEVGSEHVLFAILLNPDIMASRLLELAGYRLRDSGKGEPRFADLRKAIELNAGYSKE
TIKAIHELRKPKKSKSVGTFSEMMKPQSTAGELSDFTRDLTEMARQGLLEPVIGREKEVSRMVQVLCRKTKNNPVLVGDA
GVGKTALAYGLAQRIANGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQLIDDIEADGKIILFVDELHTIMGSGSG
IDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPSVEDAYQILLGLKPSYEQYHNVTISDT
AIHTAVKLAQRYLTSKQLPDSAIDLLDEASAMVQSMVKKTQPDFITPLDQALLDGDMSKVSALLAKEDKQPKLKPTAVTE
DDMLHTLSRLSGIPLEKLTQADSKKYLNLEKELHKRVVGQEMAVSAIARAIRRNQSGIRTGRRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYAVLLFDEVEKAHPDIFNILLQV
LDDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKAIGHDHQAMEKRILEELKKAYRPEFINRIDEKVVFHS
LTQENMRDVVKIMVKPLIAALAEKHISLKFQPSALKYLSEAGYDVEMGARPLRRTLQTEVEDRLAELMLSGELSSGQSLK
IGVSRGKLAFDIA

Nucleotide

• Length: 2442 bp

>NTDB_id=558759 KCL43_RS00840 WP_212573364.1 151450..153891(+) (clpC) [Streptococcus equi subsp. zooepidemicus strain IN-6992]
GTGATGACTTATTCATTAAAGATGCAAGACATTTTTAATCAGGCTCAATTTCAAGCAGAGCGCTTTGATAGTCCTTACCT
TGAGACCTGGCATATTTTATTAGCTATGGTAGCTGTTGACCATTCCTTAGCGGCCATGGTGTTAAGCGAATTTGAACGAA
AGATTAAGGCCGAAGAGTATGAGGCTGCTGCTATTTTAGCCATGGGAAAAAGTCCCAAAGAGGTGACTTCTGTCCAATTC
AAGCCACAATCCAAGGCCTTATCAGAAATACTAGCATTTGCTCATGCTATCTGTAAGGTTACCAATGAGCATGAGGTTGG
CTCAGAGCATGTGCTTTTTGCTATTTTGCTCAATCCGGATATTATGGCCAGTCGTCTGTTAGAACTAGCGGGCTACAGGC
TCAGAGATTCTGGCAAAGGAGAGCCTCGCTTTGCAGATTTGCGTAAGGCTATTGAGCTAAATGCCGGCTATAGCAAGGAA
ACTATTAAGGCGATTCATGAGTTGCGTAAGCCTAAAAAGAGTAAATCAGTAGGCACCTTTTCTGAAATGATGAAGCCACA
GAGTACAGCTGGTGAGCTATCAGACTTTACAAGAGACCTGACAGAGATGGCAAGACAGGGCTTATTAGAGCCAGTCATCG
GACGAGAAAAAGAGGTGTCACGTATGGTTCAGGTGCTTTGTCGTAAGACGAAAAATAATCCTGTTCTTGTTGGTGATGCG
GGTGTCGGAAAAACTGCTCTAGCTTATGGCTTAGCGCAGCGAATTGCTAATGGAGCCATTCCTTATGAATTACAAGACAT
GCGTGTCTTGGAGCTTGACATGATGAGTGTGGTTGCAGGTACCCGTTTTCGTGGGGATTTTGAAGAGCGCATGAATCAAC
TCATTGACGATATTGAAGCAGATGGTAAGATCATTTTGTTTGTCGATGAGCTACATACCATTATGGGATCAGGAAGTGGT
ATTGACAGCACACTTGATGCCGCTAATATTCTAAAGCCAGCCCTTTCTCGCGGTACCCTGCATATGGTTGGCGCTACAAC
TCAAGAGGAATATCAAAAGCACATTGAAAAGGACGCAGCTCTTTCTCGTCGCTTTGCCAAGATATTGATTGAGGAGCCTA
GTGTTGAGGACGCTTATCAGATTTTGCTTGGCTTGAAGCCTTCCTATGAACAGTACCATAATGTAACAATCTCTGATACA
GCTATCCATACTGCTGTGAAGCTGGCTCAGCGCTATTTGACAAGTAAGCAGCTTCCAGACTCAGCGATTGATCTGCTTGA
TGAAGCCAGTGCGATGGTGCAAAGTATGGTTAAAAAGACGCAGCCTGACTTTATAACACCGCTTGATCAAGCCCTGCTTG
ATGGTGATATGAGCAAGGTGTCGGCCCTTTTAGCCAAAGAGGATAAGCAACCAAAGCTAAAACCAACAGCAGTCACTGAA
GATGATATGTTACACACCTTAAGCAGGCTATCAGGTATTCCACTAGAAAAACTAACTCAGGCGGATAGTAAAAAATACCT
AAATTTGGAAAAGGAATTGCATAAGCGTGTTGTTGGTCAGGAAATGGCTGTTTCTGCTATTGCACGAGCCATTCGTCGTA
ATCAGTCAGGCATTCGCACAGGCAGACGCCCGATTGGCTCCTTTATGTTTCTTGGTCCAACCGGTGTCGGAAAAACAGAG
CTAGCAAAGGCCTTGGCCGAATTACTCTTTGATGATGAGTCAGCCCTTATTCGTTTTGACATGTCTGAGTACATGGAAAA
ATTTGCAGCCTCTCGTCTCAATGGTGCTCCTCCTGGCTATGTTGGCTATGATGAAGGAGGCGAGCTAACCGAAAAGGTTA
GAAATAAGCCTTATGCCGTTCTTCTTTTTGATGAGGTCGAAAAGGCTCACCCAGACATCTTTAATATCCTGCTGCAGGTC
CTTGATGATGGTATGTTAACAGATAGTCGTGGACGTAAGGTTGATTTTTCAAACACGATTATTATCATGACGAGCAACCT
AGGAGCAACTGCTCTAAGAGATGATAAGACGGTTGGATTTGGCGCTAAAGCGATCGGTCATGACCATCAAGCAATGGAAA
AGCGTATTTTAGAGGAATTGAAAAAGGCTTATCGGCCTGAATTTATCAACAGAATTGATGAAAAGGTGGTCTTCCACAGC
CTAACACAGGAAAACATGCGTGATGTGGTCAAAATTATGGTTAAGCCGCTGATTGCAGCCTTGGCAGAAAAGCATATTAG
CCTTAAGTTCCAGCCATCAGCTCTCAAGTACTTGTCTGAAGCTGGTTACGATGTTGAAATGGGGGCTCGCCCACTTCGTC
GCACCTTGCAAACAGAGGTTGAGGACAGGTTAGCAGAATTAATGCTGTCAGGAGAGTTATCAAGCGGTCAAAGCCTCAAG
ATTGGTGTATCACGTGGGAAGTTAGCTTTTGATATTGCTTGA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (374-457)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (15-51)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (94-131)

• AAA domain (Cdc48 subfamily) (AAA_2) (543-714)

• ATPase family associated with various cellular activities (AAA) (AAA) (235-367)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (721-800)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus mutans UA159	74.293	100	0.743
clpC	Streptococcus thermophilus LMD-9	72.059	100	0.723
clpC	Streptococcus thermophilus LMG 18311	71.814	100	0.721
clpC	Streptococcus pneumoniae Rx1	65.848	100	0.659
clpC	Streptococcus pneumoniae D39	65.848	100	0.659
clpC	Streptococcus pneumoniae TIGR4	65.725	100	0.658
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	48.746	100	0.502
clpC	Bacillus subtilis subsp. subtilis str. 168	43.976	100	0.449
clpE	Streptococcus mutans UA159	45.666	79.459	0.363