Detailed information NTG0558744

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: KC397_RS16780
• Genome accession: NZ_CP073274
• Coordinates: 320153..322720 (+)
• Length: 855 a.a.
• NCBI ID: WP_020433712.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain 19-VB00936
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 315153..327720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KC397_RS16750 (KC397_16750)	-	315876..316193 (-)	318	WP_020329287.1	DUF496 family protein	-
KC397_RS16755 (KC397_16755)	-	316383..316580 (+)	198	WP_212572549.1	hypothetical protein	-
KC397_RS16760 (KC397_16760)	-	316625..317260 (+)	636	WP_020433719.1	YceH family protein	-
KC397_RS16765 (KC397_16765)	-	317271..317552 (+)	282	WP_143682552.1	GIY-YIG nuclease family protein	-
KC397_RS16770 (KC397_16770)	-	317666..318823 (+)	1158	WP_212572550.1	conjugal transfer protein TraF	-
KC397_RS16775 (KC397_16775)	luxP	319034..320131 (+)	1098	WP_212572552.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
KC397_RS16780 (KC397_16780)	luxQ	320153..322720 (+)	2568	WP_020433712.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
KC397_RS16785 (KC397_16785)	-	322726..323406 (-)	681	WP_212572554.1	flagellar brake protein	-
KC397_RS16790 (KC397_16790)	-	323541..324065 (-)	525	WP_020329295.1	hypothetical protein	-
KC397_RS16795 (KC397_16795)	-	324218..324592 (-)	375	WP_212572556.1	NirD/YgiW/YdeI family stress tolerance protein	-
KC397_RS16800 (KC397_16800)	-	324760..326244 (+)	1485	WP_212572558.1	cobyric acid synthase	-
KC397_RS16805 (KC397_16805)	modA	326241..327026 (+)	786	WP_212572560.1	molybdate ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 855 a.a.
• Molecular weight: 96307.77 Da
• Isoelectric Point: 5.0360

>NTDB_id=558744 KC397_RS16780 WP_020433712.1 320153..322720(+) (luxQ) [Vibrio fluvialis strain 19-VB00936]
MGIRSSTVKQKRKIATFISRAIVTVLGALTLTVLFQSYQISSRLISQEVARTSTQTSSLIQNLFNYRLATLQIHQDSSAK
NASLIQALHGDTNDALDQYFLSVDQLELNNTPDIRFITDLKEMVWEDGNSQFYGVQSKELNAIIRKVSISSNWHLIQTPS
ELGTAYLLVRRSPIVDTATGEVIGFLYVSIVLNNNFALIETIRDSSNSQNLILTVGSEVLASTLNGDESYTAFDVLQDGM
SDMLYDKNMVAKTVLEVEGVPTYLSVYSVQSNENALSLRDNYYFWMVFALVAMVGVSILTRWWLQRRIESEIEGLMTYTH
KVAERGLDDFFPGSKIYEFDHFGRTLEHTFQRLSAQEKQFEDLFNFALSPTILWTADGELIRMNPSAQKHFLRNNAEYHS
LFSVLKRQLIPQIKLAAKGEILKEVNTEVDDKVFLWNLSPIVVENRIESIITQGQDVTSIAEAEKQSRIARREAEESARV
RADFLAKMSHELRTPLNGILGVSQLLKRTVKEKEQAEQVNVLCSSGEHLLAVLNDILDFSKIEQGKFRIQKTHFPLVDVV
SAIERIYRPLCREKGLDLSIDSNIDQTMIVNADQVRLNQILFNLLNNAVKFTHQGAISIQLNLLQEAGDTRLSISVMDTG
IGIRDADLNIIFEPFVQAESTNTREYGGSGLGLAIVHSLIEMLGGTVQVSSTFGVGTRFNIELPMERVTSEKQSIERKEA
ASRYELFDGSIHVLLVEDNHTNAFIAQAFCKKYGMVVDWVTDGLQAIEKVKEQRYDLILMDNQLPYLDGVDATRIIKQEM
GLEIPVYACTADGVVETQQAFMSAGAEYVIVKPIKEDTLHKALVNFKQDHTEWSV

Nucleotide

• Length: 2568 bp

>NTDB_id=558744 KC397_RS16780 WP_020433712.1 320153..322720(+) (luxQ) [Vibrio fluvialis strain 19-VB00936]
GTGGGCATCAGATCAAGCACAGTCAAACAAAAAAGAAAAATCGCAACGTTCATCAGCCGAGCGATTGTGACGGTGCTTGG
TGCGCTGACGTTGACGGTACTGTTTCAAAGCTATCAAATCAGCAGCCGTTTGATCTCACAGGAAGTGGCCCGCACTTCAA
CTCAAACCTCCAGCCTGATTCAGAACCTGTTCAATTACCGATTGGCCACGCTGCAGATTCATCAGGACAGTAGCGCAAAA
AATGCCAGTTTGATTCAGGCTCTGCACGGCGATACTAATGACGCACTGGATCAGTACTTTCTCAGTGTTGACCAGCTTGA
ACTCAACAATACGCCGGATATTCGTTTCATTACCGACCTCAAAGAGATGGTATGGGAAGACGGCAACTCTCAGTTTTATG
GGGTTCAGTCGAAAGAGCTCAATGCCATCATCCGAAAAGTATCAATCAGCAGTAATTGGCACCTAATCCAAACGCCTTCA
GAGTTAGGCACGGCCTACCTGTTGGTTCGCCGCTCACCGATTGTGGATACTGCAACCGGCGAAGTCATCGGTTTTCTCTA
CGTCAGTATTGTACTCAACAACAACTTTGCGTTAATCGAGACCATTCGTGACAGCAGTAACTCGCAGAATCTGATTCTGA
CGGTTGGCTCAGAAGTCTTGGCGTCGACTCTGAATGGAGACGAATCCTATACAGCGTTCGATGTGTTGCAGGACGGTATG
AGCGACATGCTGTACGACAAAAACATGGTGGCGAAAACGGTTCTGGAAGTGGAAGGGGTGCCGACGTATCTCAGTGTTTA
CTCAGTGCAGAGCAACGAGAATGCGTTGAGCCTGCGTGACAATTACTATTTCTGGATGGTTTTTGCGCTGGTGGCGATGG
TGGGGGTTTCTATACTGACGCGTTGGTGGTTGCAGCGTCGTATTGAGTCGGAAATTGAAGGGTTGATGACCTACACCCAT
AAAGTGGCGGAGCGTGGACTGGATGACTTCTTCCCGGGCTCAAAAATTTACGAATTTGACCACTTCGGTCGCACGCTCGA
ACACACTTTCCAACGCCTGTCTGCGCAGGAAAAACAATTTGAGGATCTGTTTAACTTCGCTTTGTCGCCAACCATTCTCT
GGACGGCAGACGGTGAACTGATTCGTATGAACCCGTCGGCTCAAAAGCATTTTTTACGCAATAATGCGGAATATCATTCC
TTGTTCTCTGTGCTGAAACGTCAGTTGATCCCGCAGATCAAACTGGCGGCAAAAGGCGAGATTCTCAAAGAAGTGAACAC
CGAAGTCGACGACAAAGTGTTCCTGTGGAACCTGTCGCCGATTGTGGTGGAGAACCGTATCGAATCGATTATTACTCAGG
GCCAGGATGTCACCTCGATTGCAGAAGCGGAAAAGCAGAGCCGTATTGCACGCAGAGAAGCGGAAGAGTCGGCACGCGTC
AGAGCGGATTTCCTCGCGAAAATGAGCCATGAGCTGAGAACGCCACTGAATGGGATTCTGGGTGTGTCTCAACTCCTTAA
GCGTACAGTGAAGGAAAAAGAGCAGGCCGAGCAGGTTAACGTGCTGTGCAGCAGTGGTGAACATCTGCTGGCAGTACTGA
ATGACATTCTGGATTTCTCAAAGATAGAGCAGGGTAAATTCCGGATTCAGAAGACCCATTTCCCGTTGGTCGATGTGGTG
TCGGCCATTGAACGAATTTATCGTCCATTGTGTCGTGAGAAAGGCTTGGATCTCTCGATTGACAGCAATATCGACCAAAC
AATGATTGTAAATGCGGATCAGGTACGTCTGAATCAGATTCTGTTTAATCTGCTCAATAACGCCGTGAAGTTTACCCATC
AGGGCGCCATCAGCATTCAGCTGAATCTGTTGCAAGAGGCGGGCGACACTCGCCTGTCCATTTCGGTCATGGACACTGGT
ATTGGTATTCGCGATGCAGATTTGAATATCATCTTTGAGCCGTTTGTTCAGGCTGAATCAACCAATACCCGCGAATATGG
CGGCAGTGGATTGGGGCTGGCCATTGTGCACAGCCTGATTGAAATGCTTGGCGGCACGGTGCAGGTGAGCTCGACGTTTG
GTGTAGGCACACGTTTTAATATCGAATTGCCGATGGAACGTGTTACCTCTGAAAAGCAGTCGATTGAGCGCAAAGAAGCC
GCATCACGTTACGAGCTGTTCGATGGCAGCATTCATGTTCTGCTGGTTGAGGACAACCATACCAACGCGTTTATCGCACA
AGCCTTCTGCAAGAAATATGGTATGGTCGTCGACTGGGTCACGGATGGATTGCAGGCGATAGAAAAGGTCAAAGAGCAGC
GTTACGATCTGATTCTGATGGACAACCAACTGCCGTATCTCGACGGTGTGGATGCCACGCGCATCATCAAGCAAGAAATG
GGCTTAGAAATACCAGTTTACGCCTGCACCGCAGATGGCGTGGTGGAAACTCAGCAAGCGTTTATGTCTGCCGGTGCAGA
ATACGTGATCGTCAAGCCGATCAAAGAAGATACGCTGCACAAAGCATTGGTGAACTTTAAACAAGACCACACCGAGTGGT
CTGTGTAA

Domains

Predicted by InterproScan.

• LuxQ, periplasmic (LuxQ-periplasm) (41-278)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (593-706)

• Response regulator receiver domain (Response_reg) (733-843)

• His Kinase A (phospho-acceptor) domain (HisKA) (481-545)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	63.498	99.649	0.633