Detailed information NTG0558736

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KC397_RS14090
• Genome accession: NZ_CP073273
• Coordinates: 2981406..2982413 (-)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain 19-VB00936
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2976406..2987413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KC397_RS14065 (KC397_14065)	rraA	2977047..2977574 (-)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-
KC397_RS14070 (KC397_14070)	-	2977650..2978567 (-)	918	WP_020329401.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KC397_RS14075 (KC397_14075)	hslU	2978656..2979987 (-)	1332	WP_020329400.1	HslU--HslV peptidase ATPase subunit	-
KC397_RS14080 (KC397_14080)	hslV	2980029..2980583 (-)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
KC397_RS14085 (KC397_14085)	ftsN	2980719..2981276 (-)	558	WP_024373673.1	cell division protein FtsN	-
KC397_RS14090 (KC397_14090)	cytR	2981406..2982413 (-)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
KC397_RS14095 (KC397_14095)	priA	2982718..2984919 (-)	2202	WP_212570881.1	primosomal protein N'	-
KC397_RS14100 (KC397_14100)	rpmE	2985165..2985383 (+)	219	WP_020329395.1	50S ribosomal protein L31	-
KC397_RS14105 (KC397_14105)	-	2985595..2986872 (+)	1278	WP_212570883.1	malic enzyme-like NAD(P)-binding protein	-
KC397_RS14110 (KC397_14110)	metJ	2986948..2987265 (-)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=558736 KC397_RS14090 WP_020429332.1 2981406..2982413(-) (cytR) [Vibrio fluvialis strain 19-VB00936]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=558736 KC397_RS14090 WP_020429332.1 2981406..2982413(-) (cytR) [Vibrio fluvialis strain 19-VB00936]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAGGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGATATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCCG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCGGAGCTTGAGCTACCTACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAACGTGTGGCACAAATCGCCGGACCGGAAGC
CGCGGTGCTGTGTCAGTTCCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTACCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGTCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGCTCACGTTTGCTGGAA
ACTCAGCTGGTGGTGCGTGAGAGTGCAGCGCCGCCTCGTTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901