Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KCX77_RS20825 Genome accession   NZ_CP073265
Coordinates   399370..399510 (+) Length   46 a.a.
NCBI ID   WP_231104944.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CNY01     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 394370..404510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCX77_RS20820 - 396237..399329 (+) 3093 Protein_355 amino acid adenylation domain-containing protein -
  KCX77_RS20825 comS 399370..399510 (+) 141 WP_231104944.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5340.26 Da        Isoelectric Point: 10.1700

>NTDB_id=558672 KCX77_RS20825 WP_231104944.1 399370..399510(+) (comS) [Bacillus atrophaeus strain CNY01]
MNRFSKRLIKSIILYPRPSEGCISSTSLDKQAQATTSLLYFCWKEK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=558672 KCX77_RS20825 WP_231104944.1 399370..399510(+) (comS) [Bacillus atrophaeus strain CNY01]
TTGAACCGATTCAGCAAGCGCCTTATCAAGAGCATTATCCTGTATCCTCGGCCCAGCGAAGGATGTATATCCTCAACCAG
CTTGGACAAACAAGCACAAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

78.261

100

0.783