Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   KCX77_RS08185 Genome accession   NZ_CP073265
Coordinates   1583077..1583652 (+) Length   191 a.a.
NCBI ID   WP_003327252.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CNY01     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1578077..1588652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCX77_RS08155 (KCX77_08155) dapD 1578197..1578907 (+) 711 WP_003327258.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  KCX77_RS08160 (KCX77_08160) - 1578980..1580104 (+) 1125 WP_010788465.1 N-acetyldiaminopimelate deacetylase -
  KCX77_RS08165 (KCX77_08165) - 1580165..1580410 (+) 246 WP_003327256.1 YkuS family protein -
  KCX77_RS08170 (KCX77_08170) - 1580449..1581252 (-) 804 WP_003327255.1 mechanosensitive ion channel family protein -
  KCX77_RS08175 (KCX77_08175) ahpA 1581502..1582044 (+) 543 WP_003327254.1 biofilm-specific peroxidase AhpA -
  KCX77_RS08180 (KCX77_08180) - 1582129..1582587 (+) 459 WP_003327253.1 TlpA disulfide reductase family protein -
  KCX77_RS08185 (KCX77_08185) rok 1583077..1583652 (+) 576 WP_003327252.1 transcriptional regulator Rok Regulator
  KCX77_RS08190 (KCX77_08190) - 1583698..1584657 (-) 960 WP_212064526.1 sporulation protein -
  KCX77_RS08195 (KCX77_08195) - 1584801..1585385 (+) 585 WP_212064527.1 molybdenum cofactor guanylyltransferase -
  KCX77_RS08200 (KCX77_08200) - 1585457..1586476 (+) 1020 WP_212064528.1 MoeB/ThiF family adenylyltransferase -
  KCX77_RS08205 (KCX77_08205) glp 1586496..1587788 (+) 1293 WP_212064529.1 gephyrin-like molybdotransferase Glp -
  KCX77_RS08210 (KCX77_08210) mobB 1587749..1588273 (+) 525 WP_010788470.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21713.65 Da        Isoelectric Point: 9.8783

>NTDB_id=558626 KCX77_RS08185 WP_003327252.1 1583077..1583652(+) (rok) [Bacillus atrophaeus strain CNY01]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSSAAETKKDFRPERKSESLPVLAELAAQEIRSYQPQ
QASQPQPQSISSIPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSL
IKMYPEVKKPYRGQYILEGEIASDSAENVTE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=558626 KCX77_RS08185 WP_003327252.1 1583077..1583652(+) (rok) [Bacillus atrophaeus strain CNY01]
ATGTTTAATGAGAGGGAAGCTTTACGCTTGCGTTTGGAACAGTTAAATGAGGCTGAGGTTAAAGTCATCCGTGAATATCA
AATAGAGCGTGACAAAATATATGCAAAACTAAGAGAGCTTGACCGCAATGGAAGCTCAGCAGCGGAAACAAAAAAAGATT
TTCGCCCTGAAAGAAAAAGTGAGTCTCTTCCTGTGCTAGCCGAGCTTGCAGCACAAGAGATCAGAAGCTATCAGCCGCAG
CAGGCATCACAGCCGCAGCCGCAATCCATCTCTTCTATTCCGGCCGGTATTCCGGACGGAACGACAAGAAGAAGAAGAGG
AACGGCAAGACCGGGTTCAAAGGCAGCAAAGCTTCGTGAAGCGGCAATCAAAACATTAAAACGCCATAACGCAGCGATCA
AAAGCTCCGAACTTCAAAAGGAAATTGAGAAGGAAAGCGGGCTTGAAATCCCTAATATGACAACGTTTATGCAAAGTTTA
ATTAAAATGTATCCGGAAGTGAAAAAGCCATATCGCGGCCAGTACATTTTAGAAGGCGAAATCGCTTCAGACTCTGCTGA
AAATGTGACTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.598

100

0.88