Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   KCX77_RS06720 Genome accession   NZ_CP073265
Coordinates   1325816..1326979 (+) Length   387 a.a.
NCBI ID   WP_212064441.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CNY01     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1320816..1331979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCX77_RS06690 (KCX77_06690) - 1321527..1322717 (+) 1191 WP_106034590.1 putative glycoside hydrolase -
  KCX77_RS06695 (KCX77_06695) - 1322868..1323446 (+) 579 WP_212064440.1 GNAT family N-acetyltransferase -
  KCX77_RS06700 (KCX77_06700) spx 1323627..1324022 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  KCX77_RS06705 (KCX77_06705) - 1324058..1324720 (-) 663 WP_003327577.1 TerC family protein -
  KCX77_RS06715 (KCX77_06715) mecA 1325000..1325656 (+) 657 WP_010788243.1 adaptor protein MecA Regulator
  KCX77_RS06720 (KCX77_06720) coiA 1325816..1326979 (+) 1164 WP_212064441.1 competence protein CoiA family protein Machinery gene
  KCX77_RS06725 (KCX77_06725) pepF 1327208..1329037 (+) 1830 WP_212064442.1 oligoendopeptidase F -
  KCX77_RS06730 (KCX77_06730) - 1329074..1329241 (-) 168 WP_106047306.1 hypothetical protein -
  KCX77_RS06735 (KCX77_06735) spxH 1329556..1330458 (-) 903 WP_003327572.1 protease adaptor protein SpxH -
  KCX77_RS06740 (KCX77_06740) - 1330455..1330853 (-) 399 WP_010788246.1 hemoglobin-like protein HbO -
  KCX77_RS06745 (KCX77_06745) - 1331121..1331831 (-) 711 WP_063637433.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 387 a.a.        Molecular weight: 45290.79 Da        Isoelectric Point: 9.5722

>NTDB_id=558620 KCX77_RS06720 WP_212064441.1 1325816..1326979(+) (coiA) [Bacillus atrophaeus strain CNY01]
MFSAVTSEGKTVYLMKERYAATEASELRKTKFFCPVCREQLDVKLGSLKAPHFAHKQNKACTIEFEPESAYHLEGKKQLY
SWLKAKGCSPVLEPYVKSIQQRPDIMANVQGDMLAFEFQCANLAPDLLYKRTQGLKQAGAEPLWIIGGNRLKRTSRHFFQ
LSAFHWQFMKENPRQFLLFYCPEARSFYKLHHITPFYANYACASLEAIPLTKANVKDMWFSASAPSFQPAAWQNAITRFR
HKPPRFLSKEANHLRLLFYEKRQTPLPFLPPEVFAPIPLGAVFLSPVFIWQGHLYLYMTDLAEKRMSIRFSAVFRFCKMQ
IQKKRIHLRYEYSEQLLREALKQYINFLCGKEFLMEGEKEVYMVKYPVHDCRTLEGVMERDQTCFGE

Nucleotide


Download         Length: 1164 bp        

>NTDB_id=558620 KCX77_RS06720 WP_212064441.1 1325816..1326979(+) (coiA) [Bacillus atrophaeus strain CNY01]
TTGTTTAGTGCTGTGACATCAGAAGGTAAGACTGTTTACCTGATGAAAGAAAGATATGCTGCAACAGAAGCGTCGGAATT
GAGAAAAACGAAATTCTTTTGTCCGGTTTGCAGAGAACAGCTCGATGTCAAGCTCGGCTCTTTAAAAGCCCCGCATTTTG
CCCATAAGCAGAATAAAGCTTGCACCATAGAGTTTGAACCGGAGAGCGCCTACCATTTAGAAGGGAAAAAGCAGCTTTAT
TCTTGGCTGAAAGCGAAAGGATGCTCACCTGTACTGGAGCCATATGTAAAAAGCATACAGCAAAGGCCTGACATTATGGC
AAATGTACAAGGAGACATGCTGGCTTTTGAATTTCAATGCGCGAACCTTGCTCCAGACCTCTTATATAAACGCACGCAAG
GCTTAAAGCAAGCAGGGGCTGAACCGCTCTGGATCATCGGCGGAAATCGTTTAAAACGCACGTCAAGGCACTTTTTCCAG
CTATCTGCTTTTCATTGGCAATTCATGAAGGAGAATCCACGGCAGTTCCTGTTGTTTTACTGTCCGGAAGCACGCTCCTT
CTATAAGCTCCATCATATTACCCCGTTCTATGCGAATTATGCCTGCGCCTCACTCGAAGCAATCCCGCTCACAAAAGCAA
ATGTGAAGGATATGTGGTTCTCAGCATCCGCACCTTCCTTTCAGCCTGCTGCCTGGCAAAACGCCATTACCCGTTTTCGG
CATAAACCTCCCCGTTTTTTATCCAAAGAAGCGAATCATCTTCGGCTCCTTTTTTATGAAAAACGCCAGACGCCGCTCCC
ATTTTTACCGCCTGAAGTATTTGCCCCCATTCCTCTTGGAGCCGTTTTTTTAAGTCCTGTTTTCATATGGCAGGGCCATC
TTTATCTGTATATGACCGACCTCGCAGAAAAGCGTATGTCCATCAGGTTTTCTGCTGTTTTTCGATTTTGTAAGATGCAG
ATTCAAAAAAAACGGATTCATTTAAGGTACGAATATAGTGAACAGCTTTTACGTGAGGCATTGAAACAGTACATCAATTT
TCTGTGCGGGAAGGAATTTTTAATGGAGGGTGAGAAAGAAGTATATATGGTGAAATATCCAGTTCATGACTGCCGCACGC
TTGAGGGTGTTATGGAGCGCGATCAAACCTGTTTTGGGGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

57.337

95.09

0.545