Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KCX77_RS06605 Genome accession   NZ_CP073265
Coordinates   1303273..1303464 (+) Length   63 a.a.
NCBI ID   WP_010788228.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CNY01     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1298273..1308464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCX77_RS06575 (KCX77_06575) argF 1299115..1300068 (+) 954 WP_010788224.1 ornithine carbamoyltransferase -
  KCX77_RS06580 (KCX77_06580) - 1300167..1300346 (+) 180 WP_003327605.1 YjzC family protein -
  KCX77_RS06585 (KCX77_06585) - 1300375..1300563 (-) 189 WP_003327604.1 YjzD family protein -
  KCX77_RS06590 (KCX77_06590) - 1300823..1301557 (+) 735 WP_010788225.1 hypothetical protein -
  KCX77_RS06595 (KCX77_06595) - 1301640..1302215 (+) 576 WP_212064436.1 hypothetical protein -
  KCX77_RS06600 (KCX77_06600) med 1302305..1303258 (+) 954 WP_212064437.1 BMP family ABC transporter substrate-binding protein Regulator
  KCX77_RS06605 (KCX77_06605) comZ 1303273..1303464 (+) 192 WP_010788228.1 ComZ family protein Regulator
  KCX77_RS06610 (KCX77_06610) - 1303494..1303721 (-) 228 WP_010788229.1 hypothetical protein -
  KCX77_RS06615 (KCX77_06615) fabH 1303893..1304831 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  KCX77_RS06620 (KCX77_06620) fabF 1304853..1306091 (+) 1239 WP_094231800.1 beta-ketoacyl-ACP synthase II -
  KCX77_RS06625 (KCX77_06625) - 1306169..1306954 (+) 786 WP_212064438.1 DUF2268 domain-containing protein -
  KCX77_RS06630 (KCX77_06630) - 1307146..1308132 (+) 987 WP_010788232.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7112.08 Da        Isoelectric Point: 4.2564

>NTDB_id=558616 KCX77_RS06605 WP_010788228.1 1303273..1303464(+) (comZ) [Bacillus atrophaeus strain CNY01]
MQHEKSLEFLQIAMKYLPEAKAELEKSGIELSAESIQPFMNLFSTVMAEAYELGKSDAKSENE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=558616 KCX77_RS06605 WP_010788228.1 1303273..1303464(+) (comZ) [Bacillus atrophaeus strain CNY01]
ATGCAGCATGAAAAATCACTTGAATTTTTGCAAATCGCGATGAAATATTTGCCGGAAGCAAAAGCGGAGCTGGAAAAATC
GGGGATCGAGCTGTCCGCCGAGTCCATACAGCCATTTATGAATCTGTTTTCAACGGTGATGGCGGAAGCTTACGAGCTTG
GCAAGTCCGACGCAAAATCAGAAAATGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

90.476

100

0.905