Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KCX77_RS05085 Genome accession   NZ_CP073265
Coordinates   1015132..1015923 (+) Length   263 a.a.
NCBI ID   WP_212064347.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CNY01     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1010132..1020923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCX77_RS05055 (KCX77_05055) - 1010975..1011988 (+) 1014 WP_087941833.1 iron ABC transporter permease -
  KCX77_RS05060 (KCX77_05060) - 1012106..1012987 (+) 882 WP_212064345.1 PhzF family phenazine biosynthesis isomerase -
  KCX77_RS05065 (KCX77_05065) - 1013068..1013652 (+) 585 WP_212064346.1 nitroreductase -
  KCX77_RS05070 (KCX77_05070) - 1013692..1013883 (-) 192 WP_004430587.1 YfhD family protein -
  KCX77_RS05075 (KCX77_05075) - 1013961..1014071 (-) 111 WP_003223230.1 YfhE family protein -
  KCX77_RS05080 (KCX77_05080) - 1014130..1015041 (-) 912 WP_106047826.1 TIGR01777 family oxidoreductase -
  KCX77_RS05085 (KCX77_05085) recX 1015132..1015923 (+) 792 WP_212064347.1 recombination regulator RecX Regulator
  KCX77_RS05090 (KCX77_05090) - 1015931..1016257 (+) 327 WP_010788005.1 YfhH family protein -
  KCX77_RS05095 (KCX77_05095) - 1016392..1017591 (+) 1200 WP_212064348.1 MFS transporter -
  KCX77_RS05100 (KCX77_05100) - 1017632..1017784 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  KCX77_RS05105 (KCX77_05105) - 1017901..1018170 (+) 270 WP_004430597.1 YfhJ family protein -
  KCX77_RS05110 (KCX77_05110) - 1018298..1018834 (+) 537 WP_010788007.1 SH3 domain-containing protein -
  KCX77_RS05115 (KCX77_05115) - 1019008..1019355 (+) 348 WP_010788008.1 SdpI family protein -
  KCX77_RS05120 (KCX77_05120) - 1019342..1020208 (+) 867 WP_212064349.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30980.21 Da        Isoelectric Point: 7.4551

>NTDB_id=558607 KCX77_RS05085 WP_212064347.1 1015132..1015923(+) (recX) [Bacillus atrophaeus strain CNY01]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLRKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=558607 KCX77_RS05085 WP_212064347.1 1015132..1015923(+) (recX) [Bacillus atrophaeus strain CNY01]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTTGTGAAATTCGACCTGAAAAAAGGAAAAGAACTCGATGACCTTGATATCGTTGAGATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGGGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGACCATTTAAGAAAGAAAGAAATTTCAGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGATGATGATACGATCAAAGAGACATTGAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATTGGAAAAATCCTAAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TCTGCAGCGAAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAGATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.51

100

0.825