Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | KCX77_RS00575 | Genome accession | NZ_CP073265 |
| Coordinates | 103423..105861 (+) | Length | 812 a.a. |
| NCBI ID | WP_003328317.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus strain CNY01 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98423..110861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KCX77_RS00560 (KCX77_00560) | ctsR | 101300..101764 (+) | 465 | WP_003328320.1 | transcriptional regulator CtsR | - |
| KCX77_RS00565 (KCX77_00565) | - | 101778..102335 (+) | 558 | WP_003328319.1 | UvrB/UvrC motif-containing protein | - |
| KCX77_RS00570 (KCX77_00570) | - | 102335..103426 (+) | 1092 | WP_010787416.1 | protein arginine kinase | - |
| KCX77_RS00575 (KCX77_00575) | clpC | 103423..105861 (+) | 2439 | WP_003328317.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| KCX77_RS00580 (KCX77_00580) | radA | 105946..107325 (+) | 1380 | WP_035174932.1 | DNA repair protein RadA | Machinery gene |
| KCX77_RS00585 (KCX77_00585) | disA | 107329..108411 (+) | 1083 | WP_010787418.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| KCX77_RS00590 (KCX77_00590) | - | 108532..109632 (+) | 1101 | WP_003328314.1 | PIN/TRAM domain-containing protein | - |
| KCX77_RS00595 (KCX77_00595) | ispD | 109646..110344 (+) | 699 | WP_212064093.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| KCX77_RS00600 (KCX77_00600) | ispF | 110337..110813 (+) | 477 | WP_003328312.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 812 a.a. Molecular weight: 90364.87 Da Isoelectric Point: 5.9519
>NTDB_id=558598 KCX77_RS00575 WP_003328317.1 103423..105861(+) (clpC) [Bacillus atrophaeus strain CNY01]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESVQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMVV
SSWTGVPVSKIAQTETDKLLNMENLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLN
EIVTLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDGE
FVVKTTAKTNNL
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESVQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMVV
SSWTGVPVSKIAQTETDKLLNMENLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLN
EIVTLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDGE
FVVKTTAKTNNL
Nucleotide
Download Length: 2439 bp
>NTDB_id=558598 KCX77_RS00575 WP_003328317.1 103423..105861(+) (clpC) [Bacillus atrophaeus strain CNY01]
ATGATGTTTGGAAGATTTACAGAGCGCGCGCAAAAGGTATTGGCACTTGCACAGGAGGAAGCACTTCGTTTAGGGCATAA
CAATATTGGCACAGAGCACATTTTATTAGGACTGGTACGCGAAGGAGAAGGTATTGCAGCTAAAGCGCTTCAAGCACTTG
GTCTCGGTTCTGATAAAATCCAAAAAGAAGTGGAGAGCTTAATTGGACGCGGACAAGAAATGTCCCAAACCATTCATTAT
ACTCCGAGAGCTAAAAAAGTGATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGTCATTCTTACGTAGGGACAGAACA
TATCCTTCTCGGACTCATACGCGAAGGAGAAGGTGTGGCAGCGAGAGTGCTGAATAACCTTGGCGTAAGTTTAAATAAAG
CGAGACAGCAGGTTCTCCAGCTTCTTGGAAGCAATGAAACAGGATCTTCTGCCTCAGGAACAAACAGCAATGCAAATACT
CCGACGCTTGACAGCTTGGCGAGAGATTTAACGGCGATAGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
GGAAATTCAGCGGGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTGCTTATCGGGGAACCGGGTGTAGGGA
AAACGGCTATTGCTGAAGGGCTTGCACAGCAAATCATCAACAATGAAGTTCCTGAAATCTTGCGCGATAAACGTGTTATG
ACATTAGACATGGGAACGGTCGTTGCCGGCACAAAGTACCGTGGTGAATTTGAAGACCGTTTGAAAAAGGTAATGGATGA
AATTCGTCAAGCAGGCAATATTATTCTCTTTATTGATGAGCTTCATACATTGATAGGGGCAGGCGGAGCAGAAGGTGCGA
TTGATGCATCAAATATTTTAAAGCCGTCACTTGCCCGCGGAGAGCTGCAATGTATCGGGGCGACCACTCTTGATGAGTAC
CGCAAATATATTGAAAAAGATGCAGCGCTTGAGCGCCGATTCCAACCAATCCAGGTTGATCAGCCTTCTGTAGACGAAAG
CGTTCAAATATTAAGAGGGTTACGTGACCGGTATGAAGCGCATCACCGGGTTTCAATTACTGATGAAGCCATTGAAGCTG
CGGTTAAGCTTTCTGACCGATATATTTCTGATCGGTTCCTTCCGGATAAAGCAATTGATTTGATTGATGAAGCAGGTTCT
AAAGTAAGATTGCGTTCATTTACAACTCCACCAAATTTGAAGGAGCTTGAACAAAAACTTGATGAAGTCCGTAAAGAAAA
AGATGCAGCGGTGCAAAGCCAAGAGTTTGAAAAAGCCGCCTCATTACGCGATACAGAACAGCGTTTAAGAGAACAAGTAG
AAGATACAAAGAAAACGTGGAAAGAGAAGCAAGGCCAGGAAAATTCAGAAGTATCGGTTGAAGATATCGCAATGGTTGTT
TCAAGTTGGACCGGGGTTCCTGTTTCTAAAATTGCGCAAACTGAAACGGATAAGCTGCTGAATATGGAAAATCTCCTTCA
TTCCCGTGTTATCGGGCAGGATGAAGCCGTTGTAGCTGTTGCTAAGGCTGTCAGACGCGCGAGAGCAGGGTTGAAAGACC
CGAAACGGCCGATTGGTTCATTCGTATTCTTAGGCCCTACAGGTGTAGGGAAAACCGAGCTTGCAAGAGCACTTGCTGAA
TCCATTTTCGGTGATGAAGAAGCGATGATCAGAATCGATATGTCAGAATACATGGAGAAACACTCGACATCAAGACTTGT
CGGTTCACCTCCTGGATATGTCGGTTATGATGAAGGCGGTCAGTTAACAGAAAAAGTTAGAAGAAAACCATACTCTGTTG
TGCTGCTTGATGAAATTGAAAAAGCGCATCCGGATGTATTCAATATTCTTTTACAAGTGCTTGAAGATGGCCGTCTGACT
GATTCGAAGGGACGCACAGTTGATTTCCGCAATACAATTCTTATCATGACGTCGAACGTCGGAGCCAGCGAGCTAAAACG
CAATAAGTACGTTGGTTTTAATGTTCAGGATGAGACTCAAAATCACAAAGACATGAAAGATAAAGTAATGGGTGAGCTGA
AACGGGCATTCAGACCGGAGTTTATCAACCGTATTGATGAAATCATTGTATTCCACTCACTCGAGAAGAAACATCTGAAT
GAAATTGTGACACTTATGTCGGATCAATTAACAAAACGCCTAAAAGAACAAGACCTATCAATTGAGCTGACAGAAGCTGC
AAAAGCGAAAGTAGCTGATGAAGGGGTAGATCTGGAGTACGGCGCCCGTCCGTTAAGAAGAGCAATTCAAAAGCATGTAG
AAGACCGTTTATCAGAGGAACTGCTTAGAGGAAATATTGATAAAGGTCAGCATATTGTGCTTGATGTTGAAGATGGAGAG
TTTGTCGTAAAAACGACAGCTAAAACGAATAATTTATAA
ATGATGTTTGGAAGATTTACAGAGCGCGCGCAAAAGGTATTGGCACTTGCACAGGAGGAAGCACTTCGTTTAGGGCATAA
CAATATTGGCACAGAGCACATTTTATTAGGACTGGTACGCGAAGGAGAAGGTATTGCAGCTAAAGCGCTTCAAGCACTTG
GTCTCGGTTCTGATAAAATCCAAAAAGAAGTGGAGAGCTTAATTGGACGCGGACAAGAAATGTCCCAAACCATTCATTAT
ACTCCGAGAGCTAAAAAAGTGATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGTCATTCTTACGTAGGGACAGAACA
TATCCTTCTCGGACTCATACGCGAAGGAGAAGGTGTGGCAGCGAGAGTGCTGAATAACCTTGGCGTAAGTTTAAATAAAG
CGAGACAGCAGGTTCTCCAGCTTCTTGGAAGCAATGAAACAGGATCTTCTGCCTCAGGAACAAACAGCAATGCAAATACT
CCGACGCTTGACAGCTTGGCGAGAGATTTAACGGCGATAGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
GGAAATTCAGCGGGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTGCTTATCGGGGAACCGGGTGTAGGGA
AAACGGCTATTGCTGAAGGGCTTGCACAGCAAATCATCAACAATGAAGTTCCTGAAATCTTGCGCGATAAACGTGTTATG
ACATTAGACATGGGAACGGTCGTTGCCGGCACAAAGTACCGTGGTGAATTTGAAGACCGTTTGAAAAAGGTAATGGATGA
AATTCGTCAAGCAGGCAATATTATTCTCTTTATTGATGAGCTTCATACATTGATAGGGGCAGGCGGAGCAGAAGGTGCGA
TTGATGCATCAAATATTTTAAAGCCGTCACTTGCCCGCGGAGAGCTGCAATGTATCGGGGCGACCACTCTTGATGAGTAC
CGCAAATATATTGAAAAAGATGCAGCGCTTGAGCGCCGATTCCAACCAATCCAGGTTGATCAGCCTTCTGTAGACGAAAG
CGTTCAAATATTAAGAGGGTTACGTGACCGGTATGAAGCGCATCACCGGGTTTCAATTACTGATGAAGCCATTGAAGCTG
CGGTTAAGCTTTCTGACCGATATATTTCTGATCGGTTCCTTCCGGATAAAGCAATTGATTTGATTGATGAAGCAGGTTCT
AAAGTAAGATTGCGTTCATTTACAACTCCACCAAATTTGAAGGAGCTTGAACAAAAACTTGATGAAGTCCGTAAAGAAAA
AGATGCAGCGGTGCAAAGCCAAGAGTTTGAAAAAGCCGCCTCATTACGCGATACAGAACAGCGTTTAAGAGAACAAGTAG
AAGATACAAAGAAAACGTGGAAAGAGAAGCAAGGCCAGGAAAATTCAGAAGTATCGGTTGAAGATATCGCAATGGTTGTT
TCAAGTTGGACCGGGGTTCCTGTTTCTAAAATTGCGCAAACTGAAACGGATAAGCTGCTGAATATGGAAAATCTCCTTCA
TTCCCGTGTTATCGGGCAGGATGAAGCCGTTGTAGCTGTTGCTAAGGCTGTCAGACGCGCGAGAGCAGGGTTGAAAGACC
CGAAACGGCCGATTGGTTCATTCGTATTCTTAGGCCCTACAGGTGTAGGGAAAACCGAGCTTGCAAGAGCACTTGCTGAA
TCCATTTTCGGTGATGAAGAAGCGATGATCAGAATCGATATGTCAGAATACATGGAGAAACACTCGACATCAAGACTTGT
CGGTTCACCTCCTGGATATGTCGGTTATGATGAAGGCGGTCAGTTAACAGAAAAAGTTAGAAGAAAACCATACTCTGTTG
TGCTGCTTGATGAAATTGAAAAAGCGCATCCGGATGTATTCAATATTCTTTTACAAGTGCTTGAAGATGGCCGTCTGACT
GATTCGAAGGGACGCACAGTTGATTTCCGCAATACAATTCTTATCATGACGTCGAACGTCGGAGCCAGCGAGCTAAAACG
CAATAAGTACGTTGGTTTTAATGTTCAGGATGAGACTCAAAATCACAAAGACATGAAAGATAAAGTAATGGGTGAGCTGA
AACGGGCATTCAGACCGGAGTTTATCAACCGTATTGATGAAATCATTGTATTCCACTCACTCGAGAAGAAACATCTGAAT
GAAATTGTGACACTTATGTCGGATCAATTAACAAAACGCCTAAAAGAACAAGACCTATCAATTGAGCTGACAGAAGCTGC
AAAAGCGAAAGTAGCTGATGAAGGGGTAGATCTGGAGTACGGCGCCCGTCCGTTAAGAAGAGCAATTCAAAAGCATGTAG
AAGACCGTTTATCAGAGGAACTGCTTAGAGGAAATATTGATAAAGGTCAGCATATTGTGCTTGATGTTGAAGATGGAGAG
TTTGTCGTAAAAACGACAGCTAAAACGAATAATTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
98.025 |
99.754 |
0.978 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.625 |
98.522 |
0.489 |
| clpC | Streptococcus thermophilus LMD-9 |
46.481 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.238 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.631 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.631 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.631 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.826 |
100 |
0.446 |
| clpE | Streptococcus mutans UA159 |
53.005 |
79.926 |
0.424 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50 |
84.729 |
0.424 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.234 |
79.926 |
0.417 |
| clpE | Streptococcus pneumoniae Rx1 |
52.234 |
79.926 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
52.234 |
79.926 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
52.234 |
79.926 |
0.417 |