Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   L2Z43_RS06650 Genome accession   NZ_CP091334
Coordinates   1388708..1389649 (-) Length   313 a.a.
NCBI ID   WP_001210788.1    Uniprot ID   Q56UR7
Organism   Acinetobacter baumannii strain ATCC19606-VUB     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1383708..1394649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z43_RS06635 (L2Z43_06635) bauB 1386019..1386987 (-) 969 WP_001104129.1 siderophore-binding periplasmic lipoprotein BauB -
  L2Z43_RS06640 (L2Z43_06640) bauE 1386994..1387764 (-) 771 WP_000582118.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  L2Z43_RS06645 (L2Z43_06645) bauC 1387761..1388708 (-) 948 WP_001223275.1 ferric acinetobactin ABC transporter permease subunit BauC -
  L2Z43_RS06650 (L2Z43_06650) ceuB 1388708..1389649 (-) 942 WP_001210788.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  L2Z43_RS06655 (L2Z43_06655) basB 1390281..1392308 (+) 2028 WP_000939830.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  L2Z43_RS06660 (L2Z43_06660) basA 1392379..1394226 (-) 1848 WP_000910263.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34021.11 Da        Isoelectric Point: 8.6941

>NTDB_id=558544 L2Z43_RS06650 WP_001210788.1 1388708..1389649(-) (ceuB) [Acinetobacter baumannii strain ATCC19606-VUB]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIIQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=558544 L2Z43_RS06650 WP_001210788.1 1388708..1389649(-) (ceuB) [Acinetobacter baumannii strain ATCC19606-VUB]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAATTTGTTGAACCGGAAACGTCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGTAAAATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTATCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTAATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTTA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCAACCACAGTGATTACTGTTGGTGCCATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGAGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCGATTATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q56UR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419